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  • SUMMARY

  • TISSUE

  • BRAIN

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  • RPL15
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Brain methods
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1106.9 nTPM
HPA Brain:912.8 nTPM
GTEx:1106.9 nTPM
FANTOM5:63.4 Scaled Tags Per Million
Pig:313.8 nTPM
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SPINAL CORD - Annotated protein expression
Pending normal tissue analysis

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

912.8
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 696.2
2565 Male, age 75, midline 902.4
1981 Female, age 72, midline 819.9
2048 Male, age 55, midline 598.5
2194 Female, age 79, both hemispheres 593.0
2816 Male, age 47, midline 567.0
Cervical spinal cord, dorsal horn
nTPM: 727.8
2069 Male, age 47, both hemispheres 885.3
2173 Female, age 72, unknown 866.4
2296 Male, age 66, both hemispheres 801.3
1877 Male, age 55, unknown 708.6
2297 Male, age 75, both hemispheres 582.6
2721 Male, age 90, both hemispheres 522.9
Cervical spinal cord, ventral horn
nTPM: 912.8
2480 Male, age 75, both hemispheres 1387.1
2809 Male, age 90, both hemispheres 1063.2
2098 Female, age 72, unknown 933.4
2295 Male, age 66, both hemispheres 876.2
2068 Male, age 55, unknown 730.3
2820 Female, age 79, both hemispheres 486.8

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1106.9
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1106.9
Samples: 204

Max nTPM: 2243.9
Min nTPM: 576.0
Std nTPM: 252.0
Median nTPM: 1069.1
GTEX-1JN6P-0011-R9a-SM-G8LM9 60-69 years, male 2243.9
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 2071.4
GTEX-1LKK1-0011-R9a-SM-G8OLY 50-59 years, female 1700.9
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 1676.5
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 1659.5
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1649.0
GTEX-ZAJG-0011-R9a-SM-GNTAY 50-59 years, female 1646.9
GTEX-113JC-0011-R9a-SM-H6Q8K 50-59 years, female 1630.3
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 1630.3
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 1585.8
GTEX-1O9I2-0011-R9b-SM-G8OKW 50-59 years, male 1551.6
GTEX-1JMPZ-0011-R9a-SM-G8OLH 30-39 years, male 1531.4
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 1485.0
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 1480.2
GTEX-111VG-0011-R9b-SM-GHWOB 60-69 years, male 1477.9
GTEX-1R9PO-0011-R9a-SM-G8LKP 60-69 years, female 1470.3
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1463.6
GTEX-1JMQL-0011-R9b-SM-G8LLH 50-59 years, female 1457.3
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 1455.5
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 1454.5
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 1433.6
GTEX-1N5O9-0011-R9a-SM-G8LLD 60-69 years, male 1430.1
GTEX-1KD4Q-0011-R9a-SM-G8LLU 40-49 years, male 1420.9
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 1420.4
GTEX-1RAZS-0011-R9b-SM-G8OMS 50-59 years, male 1414.8
GTEX-NPJ7-0011-R9a-SM-G8W5X 60-69 years, female 1410.9
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1390.6
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1375.0
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1367.9
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 1358.6
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 1355.4
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 1354.1
GTEX-1A8G6-0011-R9a-SM-GOQZR 60-69 years, male 1353.0
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 1352.6
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 1351.0
GTEX-11GSO-0011-R9b-SM-GI4VN 60-69 years, male 1349.9
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 1340.0
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 1333.6
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 1322.1
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1318.5
GTEX-15UF6-0011-R9b-SM-GOQZG 70-79 years, female 1318.2
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1295.5
GTEX-1RDX4-0011-R9b-SM-G8LMG 50-59 years, female 1294.7
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 1285.4
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 1256.9
GTEX-117YW-0011-R9a-SM-GHWPQ 50-59 years, male 1253.5
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 1247.8
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 1244.5
GTEX-1PIIG-0011-R9b-SM-G8OLU 30-39 years, male 1236.1
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 1235.0
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 1232.7
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 1225.0
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 1222.1
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1221.1
GTEX-1J8Q2-0011-R9b-SM-GPRYH 60-69 years, male 1219.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 1218.5
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1212.7
GTEX-1QP6S-0011-R9a-SM-G8LMO 40-49 years, male 1210.2
GTEX-1QMI2-0011-R9a-SM-G8ON7 60-69 years, male 1208.4
GTEX-11NUK-0011-R9a-SM-GI4XG 50-59 years, male 1207.6
GTEX-1MCQQ-0011-R9b-SM-G8OKM 60-69 years, male 1205.5
GTEX-11DXW-0011-R9a-SM-GHWOE 40-49 years, male 1195.1
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 1192.0
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1189.3
GTEX-11NV4-0011-R9a-SM-GHWPP 60-69 years, male 1185.8
GTEX-15SHU-0011-R9a-SM-GNIOE 40-49 years, female 1185.6
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 1184.8
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 1183.8
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 1175.8
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1172.6
GTEX-11ZU8-0011-R9b-SM-GHWOL 60-69 years, male 1168.4
GTEX-1JMQJ-0011-R9b-SM-G8OKN 50-59 years, male 1158.0
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 1156.6
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1154.8
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 1152.6
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 1147.9
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1146.7
GTEX-13QIC-0011-R9a-SM-GI4WO 60-69 years, female 1145.8
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 1145.4
GTEX-1J1OQ-0011-R9b-SM-GRR22 40-49 years, female 1139.5
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 1139.2
GTEX-117XS-0011-R9b-SM-GHWOG 60-69 years, male 1138.9
GTEX-1POEN-0011-R9b-SM-G8LL1 30-39 years, female 1134.2
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 1130.5
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 1130.5
GTEX-1PPGY-0011-R9a-SM-G8LMR 60-69 years, male 1128.6
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 1127.3
GTEX-1LSVX-0011-R9b-SM-G8LL2 60-69 years, male 1125.9
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 1125.0
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 1113.7
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1106.9
GTEX-1JMOU-0011-R9b-SM-EY5YI 60-69 years, female 1097.3
GTEX-1LG7Y-0011-R9a-SM-G8LMA 50-59 years, male 1092.4
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 1091.0
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 1090.5
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1082.8
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 1080.0
GTEX-12WSI-0011-R9b-SM-GHWOU 50-59 years, male 1079.1
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1074.1
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 1073.9
GTEX-WVLH-0011-R9A-SM-H7OHH 50-59 years, male 1072.5
GTEX-1NV8Z-0011-R9b-SM-G8OME 60-69 years, male 1069.3
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1068.9
GTEX-12584-0011-R9b-SM-GI4WC 40-49 years, male 1067.5
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 1067.0
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 1066.7
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 1063.8
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 1063.4
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 1061.4
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 1061.4
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 1058.6
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1057.5
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1053.9
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 1048.7
GTEX-ZV68-0011-R9b-SM-GNTB9 50-59 years, female 1046.7
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 1045.3
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 1039.7
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1035.4
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1035.3
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 1034.4
GTEX-1PWST-0011-R9a-SM-G8OMQ 70-79 years, male 1028.9
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1025.6
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 1023.8
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 1022.3
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 1021.9
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 1021.2
GTEX-13G51-0011-R9b-SM-GHWPS 60-69 years, male 1019.8
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1016.4
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 1015.9
GTEX-1212Z-0011-R9b-SM-GHWPM 60-69 years, male 1013.2
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 1004.8
GTEX-1269C-0011-R9b-SM-GI4WM 60-69 years, female 1000.7
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 997.9
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 993.7
GTEX-14JFF-0011-R9b-SM-G9ERJ 60-69 years, male 992.1
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 989.9
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 989.3
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 988.7
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 986.5
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 983.4
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 983.1
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 982.3
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 979.8
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 975.8
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 975.8
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 965.9
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 957.4
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 957.3
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 952.8
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 948.9
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 948.4
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 940.3
GTEX-X4EP-0011-R9B-SM-4QASI 60-69 years, female 939.6
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 938.5
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 936.6
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 936.1
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 935.5
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 934.3
GTEX-13112-0011-R9b-SM-GHWOV 50-59 years, male 930.6
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 913.8
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 901.0
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 900.7
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 900.6
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 893.4
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 888.1
GTEX-1LH75-0011-R9b-SM-EY5Y9 50-59 years, female 887.8
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 879.2
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 878.1
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 872.0
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 871.5
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 868.5
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 852.7
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 847.3
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 838.7
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 834.8
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 832.6
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 831.9
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 829.0
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 827.3
GTEX-ZZPT-0011-R9a-SM-GOQYS 50-59 years, male 822.1
GTEX-1IL2U-0011-R9a-SM-GPRYC 60-69 years, male 821.9
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 821.2
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 817.5
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 817.3
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 816.3
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 811.8
GTEX-12696-0011-R9a-SM-GHWPX 60-69 years, male 808.6
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 800.5
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 796.8
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 786.8
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 786.4
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 784.3
GTEX-16GPK-0011-R9a-SM-GPI9P 60-69 years, male 779.0
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 770.8
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 754.9
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 739.9
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 717.8
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 707.6
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 705.5
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 705.4
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 693.1
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 671.5
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 613.1
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 576.0
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

63.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 63.4
FF:10181-103D1 60 years, female 75.4
FF:10159-103A6 76 years, female 51.5

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

313.8
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 299.8
Samples: 4

Max nTPM: 376.0
Min nTPM: 254.9
Sample A Female 254.9
Sample B Female 313.3
Sample C Male 376.0
Sample D Male 255.0
Ventral spinal cord
nTPM: 313.8
Samples: 4

Max nTPM: 357.0
Min nTPM: 261.9
Sample A Female 261.9
Sample B Female 357.0
Sample C Male 336.4
Sample D Male 299.8

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