HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:244.5 nTPM
HPA Brain:218.5 nTPM
GTEx:244.5 nTPM
FANTOM5:318.3 Scaled Tags Per Million
Pig:193.9 nTPM
Mouse:257.4 nTPM
Allen mouse:1.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028861
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 218.5
Sample id Sample description nTPM
Hippocampus
nTPM: 208.4
1898 Male, age 80, left hemisphere 258.4
2529 Female, age 94, left hemisphere 206.8
1911 Female, age 85, right hemisphere 205.8
1855 Male, age 76, left hemisphere 205.6
2621 Female, age 67, right hemisphere 200.4
2148 Female, age 91, left hemisphere 173.5
Dentate gyrus
nTPM: 218.5
2530 Female, age 94, left hemisphere 322.5
2010 Male, age 76, both hemispheres 249.8
1927 Female, age 91, both hemispheres 217.1
2246 Female, age 85, both hemispheres 184.5
2531 Female, age 67, both hemispheres 182.7
2528 Male, age 74, both hemispheres 154.5
Entorhinal gyrus
nTPM: 211.4
2686 Male, age 75, right hemisphere 269.7
1787 Male, age 76, left hemisphere 216.2
2117 Female, age 91, right hemisphere 213.0
1938 Female, age 85, left hemisphere 203.1
2764 Male, age 80, right hemisphere 189.7
2613 Female, age 94, left hemisphere 176.9
Hippocampus, CA1
nTPM: 201.1
2749 Male, age 80, left hemisphere 241.8
1873 Female, age 85, both hemispheres 217.5
2045 Male, age 76, both hemispheres 200.6
2082 Female, age 91, right hemisphere 182.4
2527 Male, age 74, both hemispheres 163.3
Hippocampus, CA2
nTPM: 211.6
1892 Male, age 76, both hemispheres 254.8
1963 Male, age 80, left hemisphere 253.7
1940 Female, age 85, left hemisphere 210.8
2437 Female, age 94, left hemisphere 198.5
2113 Female, age 91, right hemisphere 184.2
2249 Male, age 74, both hemispheres 167.7
Hippocampus, CA3
nTPM: 174.5
2137 Male, age 80, left hemisphere 228.6
1867 Male, age 76, both hemispheres 227.1
1891 Female, age 85, both hemispheres 203.4
2861 Female, age 67, both hemispheres 141.6
2436 Male, age 74, both hemispheres 138.3
2620 Female, age 94, left hemisphere 108.1
Parahippocampal cortex
nTPM: 187.5
1850 Male, age 80, both hemispheres 233.8
2018 Male, age 76, both hemispheres 222.4
1933 Female, age 85, both hemispheres 200.2
2532 Female, age 72, left hemisphere 194.6
1990 Female, age 91, right hemisphere 190.6
2245 Female, age 91, both hemispheres 183.4
2692 Male, age 74, both hemispheres 181.9
2250 Female, age 67, right hemisphere 159.4
2622 Female, age 67, right hemisphere 155.5
2693 Female, age 94, both hemispheres 152.8
Perirhinal gyrus
nTPM: 201.2
1841 Female, age 85, right hemisphere 223.5
2848 Male, age 76, right hemisphere 218.0
1794 Male, age 80, right hemisphere 214.0
1847 Female, age 91, left hemisphere 204.2
2521 Female, age 94, right hemisphere 146.0
Subiculum
nTPM: 209.0
2438 Female, age 94, left hemisphere 255.7
1901 Male, age 80, both hemispheres 241.6
2042 Male, age 76, both hemispheres 234.3
2729 Female, age 91, right hemisphere 183.0
1977 Female, age 85, both hemispheres 182.5
2619 Male, age 74, both hemispheres 156.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 244.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 244.5
Samples: 255

Max nTPM: 716.9
Min nTPM: 125.6
Std nTPM: 89.2
Median nTPM: 220.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 716.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 650.1
GTEX-ZAJG-0011-R1a-SM-GQ1CV 50-59 years, female 596.8
GTEX-1N5O9-0011-R1b-SM-F3K4W 60-69 years, male 592.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 498.5
GTEX-1R9K4-0011-R1a-SM-F342F 60-69 years, male 488.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 485.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 471.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 445.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 429.0
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 427.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 318.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 318.3
FF:10169-103B7 60 years, female 363.5
FF:10153-102I9 76 years, female 273.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 193.9
Pig sample Sample description nTPM
Subiculum
nTPM: 171.2
Samples: 4

Max nTPM: 200.1
Min nTPM: 145.3
Sample A Female 200.1
Sample B Female 163.0
Sample C Male 145.3
Sample D Male 176.5
Dorsal hippocampus
nTPM: 193.9
Samples: 4

Max nTPM: 233.0
Min nTPM: 149.8
Sample A Female 233.0
Sample B Female 190.5
Sample C Male 202.4
Sample D Male 149.8
Entorhinal cortex
nTPM: 179.8
Samples: 4

Max nTPM: 228.4
Min nTPM: 146.9
Sample A Female 176.2
Sample B Female 228.4
Sample C Male 167.7
Sample D Male 146.9
Ventral hippocampus
nTPM: 161.5
Samples: 4

Max nTPM: 176.5
Min nTPM: 144.0
Sample A Female 176.0
Sample B Female 149.3
Sample C Male 144.0
Sample D Male 176.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 257.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 257.4
Samples: 4

Max nTPM: 294.5
Min nTPM: 235.8
Sample A Male 235.8
Sample B Male 294.5
Sample C Female 240.9
Sample D Female 258.5
Hippocampal formation
nTPM: 212.7
Samples: 4

Max nTPM: 256.2
Min nTPM: 184.4
Sample A Male 256.2
Sample B Male 210.6
Sample C Female 184.4
Sample D Female 199.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
75198178 Antisense, RP_060502_02_B04, Mouse strain C57BL/6J (56 days, male) 1.2

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