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  • TISSUE

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  • NAP1L1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:223.9 nTPM
HPA Brain:293.1 nTPM
GTEx:223.9 nTPM
Pig:193.2 nTPM
Mouse:212.3 nTPM
Allen mouse:0.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

293.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 181.1
1961 Female, age 42, unknown 213.1
2226 Male, age 75, left hemisphere 149.2
Dorsomedial nucleus
nTPM: 198.3
2017 Female, age 42, unknown 205.4
2041 Female, age 72, unknown 203.8
1989 Male, age 62, unknown 185.8
Lateral hypothalamic area
nTPM: 234.4
2412 Male, age 62, unknown 277.4
2271 Male, age 75, both hemispheres 223.5
2228 Male, age 66, unknown 222.4
1791 Male, age 80, right hemisphere 214.5
Mammillary body
nTPM: 243.5
1948 Female, age 72, unknown 266.1
1834 Female, age 42, unknown 256.2
1945 Male, age 80, right hemisphere 246.1
1923 Female, age 72, unknown 239.5
2413 Male, age 66, unknown 209.6
Paraventricular nucleus
nTPM: 276.6
2700 Male, age 62, unknown 276.6
Preoptic area
nTPM: 215.8
2414 Female, age 72, unknown 231.6
1861 Female, age 42, unknown 229.8
1907 Male, age 80, right hemisphere 186.0
Supraoptic nucleus
nTPM: 293.1
2043 Male, age 62, unknown 323.4
1894 Female, age 72, unknown 316.9
2835 Female, age 72, unknown 239.0
Ventromedial nucleus
nTPM: 226.9
1982 Female, age 72, unknown 228.2
1822 Female, age 42, unknown 225.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

223.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 223.9
Samples: 257

Max nTPM: 895.7
Min nTPM: 128.4
Std nTPM: 111.7
Median nTPM: 190.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 895.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 866.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 860.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 758.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 753.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 519.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 509.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 470.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 467.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 435.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 423.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 402.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 400.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 400.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 395.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 395.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 391.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 376.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 368.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 360.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 356.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 348.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 348.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 335.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 329.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 311.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 308.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 307.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 301.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 301.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 300.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 297.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 297.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 296.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 292.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 291.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 291.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 289.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 288.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 288.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 282.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 282.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 281.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 279.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 275.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 274.5
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 273.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 272.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 271.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 269.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 269.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 269.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 266.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 263.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 263.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 258.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 256.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 255.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 253.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 252.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 251.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 250.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 245.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 244.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 243.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 243.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 241.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 241.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 239.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 238.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 237.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 237.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 237.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 235.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 233.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 231.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 231.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 230.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 229.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 228.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 228.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 228.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 227.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 227.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 226.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 225.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 224.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 224.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 223.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 221.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 220.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 219.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 217.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 217.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 216.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 213.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 212.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 209.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 207.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 206.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 206.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 206.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 205.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 204.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 204.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 203.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 202.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 202.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 200.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 200.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 200.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 198.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 197.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 196.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 196.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 195.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 195.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 194.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 194.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 193.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 193.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 193.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 193.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 191.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 191.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 191.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 191.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 191.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 190.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 189.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 189.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 188.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 188.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 187.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 187.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 186.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 186.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 186.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 185.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 185.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 185.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 184.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 183.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 182.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 182.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 181.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 181.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 180.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 179.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 179.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 178.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 178.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 178.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 177.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 177.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 176.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 176.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 176.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 175.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 174.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 173.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 172.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 172.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 171.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 169.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 169.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 168.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 168.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 168.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 168.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 168.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 168.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 168.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 168.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 168.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 168.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 167.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 167.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 167.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 167.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 165.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 165.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 165.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 165.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 165.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 165.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 165.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 165.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 164.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 164.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 164.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 164.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 163.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 163.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 163.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 163.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 163.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 162.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 161.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 161.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 161.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 161.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 160.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 160.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 159.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 159.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 158.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 157.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 157.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 157.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 157.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 156.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 155.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 155.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 155.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 155.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 154.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 153.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 152.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 152.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 152.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 151.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 151.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 150.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 149.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 148.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 148.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 147.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 146.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 145.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 144.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 143.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 142.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 142.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 142.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 141.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 140.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 140.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 139.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 138.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 138.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 138.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 137.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 137.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 137.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 137.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 137.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 134.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 134.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 134.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 133.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 132.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 129.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 129.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 129.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 128.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 128.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

193.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 193.3
Samples: 4

Max nTPM: 253.5
Min nTPM: 148.8
Sample A Female 253.5
Sample B Female 195.4
Sample C Male 175.4
Sample D Male 148.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

212.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 212.3
Samples: 4

Max nTPM: 223.6
Min nTPM: 196.8
Sample A Male 218.3
Sample B Male 223.6
Sample C Female 210.6
Sample D Female 196.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.5
75198178 Antisense, RP_060502_02_B04, Mouse strain C57BL/6J (56 days, male) 0.5

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