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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
335.9
nTPM
HPA Brain:
286.1
nTPM
GTEx:
335.9
nTPM
FANTOM5:
371.8
Scaled Tags Per Million
Pig:
241.8
nTPM
Mouse:
202.1
nTPM
Allen mouse:
0.5
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
286.1
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 250.4
2666
Male, age 74, left hemisphere
321.5
2586
Male, age 75, left hemisphere
273.7
1827
Male, age 72, unknown
255.5
2411
Female, age 72, unknown
254.8
1833
Male, age 53, unknown
252.4
1830
Male, age 51, unknown
247.3
1870
Female, age 42, unknown
244.2
2828
Female, age 72, unknown
236.8
2019
Male, age 18, unknown
228.9
2219
Male, age 76, both hemispheres
188.4
Dorsal raphe nucleus nTPM: 233.4
2016
Female, age 72, unknown
271.8
1828
Male, age 53, unknown
251.7
2047
Male, age 72, unknown
224.3
2750
Male, age 76, both hemispheres
222.3
2298
Female, age 72, unknown
197.0
Inferior colliculus nTPM: 211.7
1890
Male, age 53, unknown
224.3
1848
Female, age 42, unknown
222.0
2849
Male, age 72, unknown
204.3
2097
Female, age 72, unknown
196.1
Median raphe nucleus nTPM: 209.1
2220
Male, age 76, midline
209.1
Periaquaductal grey, anterior nTPM: 259.8
2502
Female, age 75, unknown
285.7
1947
Male, age 18, unknown
259.8
1795
Male, age 51, unknown
233.8
Periaquaductal grey, dorsal nTPM: 220.6
1831
Male, age 72, unknown
242.3
2850
Male, age 76, both hemispheres
220.8
2464
Female, age 72, unknown
213.5
1840
Male, age 53, unknown
205.7
Periaquaductal grey, lateral nTPM: 218.1
2053
Male, age 18, unknown
252.4
2140
Male, age 76, both hemispheres
205.5
2272
Male, age 74, both hemispheres
196.3
Pretectal area nTPM: 225.7
1815
Male, age 53, unknown
250.6
2407
Male, age 75, both hemispheres
243.0
2825
Male, age 18, unknown
238.7
1816
Male, age 51, unknown
234.1
2316
Male, age 76, right hemisphere
230.4
1944
Female, age 72, unknown
227.5
2007
Male, age 72, unknown
226.7
1817
Female, age 42, unknown
222.9
2224
Female, age 72, unknown
206.1
2273
Male, age 74, both hemispheres
202.9
2667
Female, age 75, unknown
199.9
Red nucleus nTPM: 286.1
2588
Male, age 74, left hemisphere
349.1
2503
Female, age 72, unknown
335.3
2584
Male, age 75, left hemisphere
322.8
1821
Female, age 72, unknown
314.1
2725
Female, age 75, unknown
296.7
1865
Male, age 51, unknown
282.1
1904
Male, age 53, unknown
270.7
2823
Male, age 76, right hemisphere
264.3
1954
Female, age 42, unknown
262.5
2769
Male, age 72, unknown
253.8
2227
Male, age 72, unknown
246.9
2785
Male, age 18, unknown
235.0
Substantia nigra nTPM: 272.7
2241
Male, age 72, unknown
305.9
2699
Male, age 18, unknown
286.4
2409
Female, age 72, unknown
283.6
1851
Male, age 51, unknown
281.4
2590
Female, age 75, unknown
274.6
2665
Male, age 74, both hemispheres
272.2
2583
Male, age 75, right hemisphere
260.9
1941
Male, age 53, unknown
259.6
1889
Female, age 72, unknown
253.4
1916
Female, age 42, unknown
248.4
Superior colliculus nTPM: 242.8
2587
Male, age 74, left hemisphere
300.8
1995
Male, age 72, unknown
259.7
1913
Female, age 42, unknown
255.6
2664
Male, age 75, both hemispheres
247.6
2261
Male, age 18, unknown
242.9
1839
Male, age 51, unknown
239.8
2668
Female, age 75, unknown
233.9
1796
Male, age 53, unknown
221.9
2087
Female, age 72, unknown
216.7
1895
Male, age 76, right hemisphere
209.3
Ventral tegmental area nTPM: 249.4
2223
Female, age 72, unknown
270.0
1942
Male, age 51, unknown
261.3
2410
Female, age 72, unknown
251.2
2021
Male, age 53, unknown
244.9
1915
Female, age 42, unknown
242.5
2218
Male, age 76, both hemispheres
226.7
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
335.9
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 335.9
Samples: 139
Max nTPM: 876.1
Min nTPM: 170.6
Std nTPM: 123.5
Median nTPM: 295.3
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
876.1
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
660.4
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
632.4
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
622.6
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
614.3
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
597.7
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
596.6
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
589.6
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
549.9
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
536.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
523.5
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
516.8
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
514.1
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
509.3
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
502.8
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
493.1
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
490.6
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
488.6
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
488.2
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
470.5
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
460.9
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
452.8
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
443.6
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
441.4
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
441.2
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
440.3
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
437.3
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
431.9
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
431.1
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
431.0
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
429.9
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
427.2
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
426.5
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
426.1
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
415.6
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
406.9
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
404.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
401.7
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
386.7
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
385.8
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
384.2
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
383.6
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
381.8
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
379.9
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
377.1
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
375.7
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
375.3
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
375.2
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
375.1
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
375.1
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
368.9
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
367.4
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
363.5
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
358.0
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
341.5
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
339.4
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
339.1
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
336.7
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
336.6
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
325.1
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
322.0
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
321.9
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
320.2
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
316.8
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
315.1
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
315.0
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
305.3
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
300.3
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
299.9
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
295.3
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
294.7
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
294.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
291.3
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
291.2
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
291.2
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
290.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
290.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
289.5
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
283.8
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
281.8
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
281.6
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
278.7
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
275.4
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
273.9
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
272.9
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
271.9
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
270.7
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
268.0
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
259.1
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
258.5
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
258.2
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
257.8
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
256.1
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
255.4
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
255.2
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
254.8
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
252.9
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
250.6
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
248.0
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
247.7
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
246.7
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
246.1
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
243.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
241.6
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
238.7
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
238.7
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
237.9
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
235.0
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
232.4
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
232.4
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
230.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
229.6
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
229.5
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
228.6
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
227.7
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
226.0
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
225.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
221.4
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
218.2
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
217.7
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
215.5
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
214.5
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
212.9
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
210.8
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
210.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
205.6
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
203.0
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
201.7
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
200.9
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
200.0
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
198.0
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
197.0
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
192.9
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
185.5
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
183.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
183.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
176.6
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
175.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
170.6
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
202.1
Mouse sample
Sample description
nTPM
Midbrain nTPM: 202.1
Samples: 4
Max nTPM: 208.1
Min nTPM: 199.3
Sample A
Male
200.7
Sample B
Male
208.1
Sample C
Female
199.3
Sample D
Female
200.1
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.