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  • TISSUE

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  • EEF1G
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:593.3 nTPM
HPA Brain:453.9 nTPM
GTEx:593.3 nTPM
Pig:285.7 nTPM
Mouse:439.7 nTPM
Allen mouse:18.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

453.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 318.1
1961 Female, age 42, unknown 369.7
2226 Male, age 75, left hemisphere 266.4
Dorsomedial nucleus
nTPM: 339.9
2041 Female, age 72, unknown 387.8
2017 Female, age 42, unknown 355.4
1989 Male, age 62, unknown 276.6
Lateral hypothalamic area
nTPM: 357.7
1791 Male, age 80, right hemisphere 395.1
2412 Male, age 62, unknown 373.7
2271 Male, age 75, both hemispheres 333.1
2228 Male, age 66, unknown 329.1
Mammillary body
nTPM: 337.1
1945 Male, age 80, right hemisphere 358.2
1834 Female, age 42, unknown 354.1
1948 Female, age 72, unknown 351.5
1923 Female, age 72, unknown 329.1
2413 Male, age 66, unknown 292.7
Paraventricular nucleus
nTPM: 360.0
2700 Male, age 62, unknown 360.0
Preoptic area
nTPM: 344.3
1861 Female, age 42, unknown 417.9
2414 Female, age 72, unknown 308.5
1907 Male, age 80, right hemisphere 306.4
Supraoptic nucleus
nTPM: 453.9
1894 Female, age 72, unknown 475.9
2043 Male, age 62, unknown 447.8
2835 Female, age 72, unknown 438.1
Ventromedial nucleus
nTPM: 414.0
1982 Female, age 72, unknown 445.9
1822 Female, age 42, unknown 382.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

593.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 593.3
Samples: 257

Max nTPM: 1499.2
Min nTPM: 326.2
Std nTPM: 156.8
Median nTPM: 561.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 1499.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 1188.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 1186.0
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 1117.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 1110.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 1010.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 998.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 954.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 911.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 906.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 902.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 901.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 899.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 891.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 869.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 857.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 853.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 849.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 840.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 834.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 829.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 820.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 819.1
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 815.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 807.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 802.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 781.8
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 780.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 778.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 773.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 771.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 757.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 755.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 750.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 749.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 740.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 740.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 737.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 736.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 733.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 728.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 726.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 725.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 725.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 725.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 725.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 724.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 717.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 715.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 712.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 704.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 695.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 691.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 690.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 687.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 673.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 672.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 671.1
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 670.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 663.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 660.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 658.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 656.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 648.6
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 643.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 642.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 642.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 634.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 633.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 633.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 632.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 632.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 631.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 630.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 629.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 623.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 623.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 623.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 619.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 616.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 616.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 616.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 615.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 614.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 607.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 604.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 603.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 602.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 599.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 599.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 598.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 597.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 596.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 596.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 593.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 593.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 586.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 586.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 583.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 583.1
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 582.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 582.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 580.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 579.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 579.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 578.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 578.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 578.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 577.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 577.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 576.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 576.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 575.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 575.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 574.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 574.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 571.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 570.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 568.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 567.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 566.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 566.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 565.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 565.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 565.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 563.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 563.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 561.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 561.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 558.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 558.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 558.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 557.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 557.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 557.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 555.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 555.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 554.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 554.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 551.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 548.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 548.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 545.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 544.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 544.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 544.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 543.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 542.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 540.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 540.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 539.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 539.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 539.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 536.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 536.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 535.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 531.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 529.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 526.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 525.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 523.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 523.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 523.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 521.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 521.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 520.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 520.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 518.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 516.5
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 515.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 514.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 512.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 511.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 511.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 510.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 510.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 508.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 507.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 507.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 506.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 504.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 504.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 503.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 501.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 501.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 500.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 500.7
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 500.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 497.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 496.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 492.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 492.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 492.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 490.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 488.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 488.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 485.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 484.0
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 483.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 481.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 479.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 477.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 477.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 476.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 476.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 474.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 474.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 473.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 472.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 472.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 471.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 471.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 470.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 468.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 467.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 466.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 462.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 461.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 460.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 459.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 459.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 458.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 458.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 457.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 454.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 454.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 454.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 454.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 450.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 449.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 442.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 432.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 431.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 430.6
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 429.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 427.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 427.0
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 425.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 423.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 422.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 421.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 420.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 419.8
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 417.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 415.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 413.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 407.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 401.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 398.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 397.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 397.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 394.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 392.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 384.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 366.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 337.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 326.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

285.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 285.7
Samples: 4

Max nTPM: 404.0
Min nTPM: 189.4
Sample A Female 404.0
Sample B Female 267.2
Sample C Male 282.0
Sample D Male 189.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

439.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 439.7
Samples: 4

Max nTPM: 505.1
Min nTPM: 395.1
Sample A Male 421.9
Sample B Male 505.1
Sample C Female 436.6
Sample D Female 395.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 18.4
74819238 Antisense, RP_060315_02_C02, Mouse strain C57BL/6J (56 days, male) 22.0
68441520 Antisense, RP_041214_02_E05, Mouse strain C57BL/6J (56 days, male) 14.9

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