On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1134.9
nTPM
HPA Brain:
268.3
nTPM
GTEx:
1134.9
nTPM
FANTOM5:
27.3
Scaled Tags Per Million
Macaque:
402.5
nTPM
AMYGDALA - SINGLE NUCLEI RNA EXPRESSIONi
RNA expression in the single nuclei cluster types identified in this brain region visualized by a UMAP plot (top) and a bar chart (to the right).
- UMAP PLOT visualizes the cells in each cluster; where each dot corresponds to a cell. For each individual cell, mouseover reveals read count and which cluster the cell belongs to. Hovering over a cluster name will highlight the corresponding cluster in the bar chart two the right. There are 2 options for color schemes: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster. There are 3 options for cell intensities: 1) Intensity, which color the individual cells according to % of max (log2(read_count+1)/log2(max(read_count)+1)*100) in five different bins (<1%,<25%,<50%,<75%,≥75%) 2) Interval, which color the individual cells according to fixed interval of read count (0,1,2-4,5-9,>10) 3) Hexagon, which color the hexagon on average read count of all cells inside the hexagon
- The BAR CHART shows RNA expression (nTPM) in each cluster type. Hovering over the cluster name reveals nTPM value and number of included cells. Hovering over a bar highlights the corresponding cluster in the UMAP plot above. Color-coding can be toggled on the top of the page, between 2 options: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster.
SINGLE NUCLEI BRAIN - AMYGDALA, NEURONSi
RNA expression in the single nuclei cluster types identified in this brain region visualized by a UMAP plot (top) and a bar chart (to the right).
- UMAP PLOT visualizes the cells in each cluster; where each dot corresponds to a cell. For each individual cell, mouseover reveals read count and which cluster the cell belongs to. Hovering over a cluster name will highlight the corresponding cluster in the bar chart two the right. There are 2 options for color schemes: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster. There are 3 options for cell intensities: 1) Intensity, which color the individual cells according to % of max (log2(read_count+1)/log2(max(read_count)+1)*100) in five different bins (<1%,<25%,<50%,<75%,≥75%) 2) Interval, which color the individual cells according to fixed interval of read count (0,1,2-4,5-9,>10) 3) Hexagon, which color the hexagon on average read count of all cells inside the hexagon
- The BAR CHART shows RNA expression (nTPM) in each cluster type. Hovering over the cluster name reveals nTPM value and number of included cells. Hovering over a bar highlights the corresponding cluster in the UMAP plot above. Color-coding can be toggled on the top of the page, between 2 options: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster.
Cell type color
Cluster color
Colored according to cell type group
Colored according to clusters
Read count filter:0
Cluster
Cell type
Expression (nCPM)
c-1
Inhibitory (GAD1/2) RXFP1+ ...
c-2
Excitatory (VGLUT1/2)
c-3
Inhibitory (GAD1/2) CXCL14+...
c-4
Excitatory (VGLUT1/2)
c-5
Excitatory (VGLUT1/2)
c-6
Inhibitory (GAD1/2) CXCL14+...
c-7
Excitatory (VGLUT1/2)
c-8
Excitatory (VGLUT1/2)
c-9
Excitatory (VGLUT1)
c-10
Excitatory (VGLUT1)
c-11
Inhibitory (GAD1/2)
c-12
Inhibitory (GAD1/2) SST+ LH...
c-13
Excitatory (VGLUT2)
c-14
Inhibitory (GAD1/2) KIT+ LA...
c-15
Inhibitory (GAD1/2) TAC1+ L...
c-16
Excitatory (VGLUT1/2)
c-17
Inhibitory (GAD1/2) TSHZ1+
c-18
Excitatory (VGLUT1/2)
c-19
Inhibitory (GAD1/2) CXCL14+...
c-20
Excitatory (VGLUT1/2)
c-21
Excitatory (VGLUT1/2)
c-22
Excitatory (VGLUT1)
c-23
Unassigned
c-24
Inhibitory (GAD1/2) PENK+ D...
c-25
Excitatory (VGLUT1/2)
c-26
Inhibitory (GAD1/2) CXCL14+...
c-27
Inhibitory (GAD1/2) LHX6+ E...
c-28
Excitatory (VGLUT1/2) SATB2...
c-29
Inhibitory (GAD1) LHX6+
c-30
Excitatory (VGLUT1/2)
c-31
Excitatory (VGLUT1/2)
c-32
Excitatory (VGLUT1)
c-33
Inhibitory (GAD1/2) TAC1+ P...
c-34
Excitatory (VGLUT1/2)
c-35
Excitatory (VGLUT1/2) ETV1+...
c-36
Inhibitory (GAD1/2) PENK+
c-37
Excitatory (VGLUT1/2)
c-38
Excitatory (VGLUT1) FOXP2+
c-39
Excitatory (VGLUT1/2)
c-40
Excitatory (VGLUT1) SOX5+
c-41
Inhibitory (GAD1/2) NOS1+ M...
c-42
Inhibitory (GAD1/2) NOS1+ S...
c-43
Excitatory (VGLUT1/2) ETV1+
c-44
Excitatory (VGLUT1/2) NOS1+
c-45
Excitatory (VGLUT2)
c-46
Excitatory (VGLUT1)
c-47
Serotonergic Inhibitory (GA...
c-48
Excitatory (VGLUT1) FOXP2+ ...
c-49
Excitatory (VGLUT1)
c-50
Inhibitory (GAD1/2) RORB+ K
c-51
CALB2+
Show allShow less
This data was generated by Siletti K et al. (2023), re-processed by HPA (see methods) and simplified for global overview
SINGLE NUCLEI BRAIN - AMYGDALA, NON-NEURONALi
RNA expression in the single nuclei cluster types identified in this brain region visualized by a UMAP plot (top) and a bar chart (to the right).
- UMAP PLOT visualizes the cells in each cluster; where each dot corresponds to a cell. For each individual cell, mouseover reveals read count and which cluster the cell belongs to. Hovering over a cluster name will highlight the corresponding cluster in the bar chart two the right. There are 2 options for color schemes: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster. There are 3 options for cell intensities: 1) Intensity, which color the individual cells according to % of max (log2(read_count+1)/log2(max(read_count)+1)*100) in five different bins (<1%,<25%,<50%,<75%,≥75%) 2) Interval, which color the individual cells according to fixed interval of read count (0,1,2-4,5-9,>10) 3) Hexagon, which color the hexagon on average read count of all cells inside the hexagon
- The BAR CHART shows RNA expression (nTPM) in each cluster type. Hovering over the cluster name reveals nTPM value and number of included cells. Hovering over a bar highlights the corresponding cluster in the UMAP plot above. Color-coding can be toggled on the top of the page, between 2 options: 1) cell type color, which is based on cell type groups used in the Single cell type part of the Single cell resource and 2) cluster color, which assigns a unique color to each cluster.
Cell type color
Cluster color
Colored according to cell type group
Colored according to clusters
Read count filter:0
Cluster
Cell type
Expression (nCPM)
c-1
Oligodendrocytes
c-2
Oligodendrocytes
c-3
Oligodendrocytes
c-4
Astrocytes
c-5
Oligodendrocyte progenitor ...
c-6
Oligodendrocyte progenitor ...
c-7
Microglia
c-8
Oligodendrocytes
c-9
Astrocytes
c-10
Astrocytes (CD44+)
c-11
Microglia
c-12
Oligodendrocyte progenitor ...
c-13
Astrocytes
c-14
Oligodendrocytes
c-15
Astrocytes
c-16
Oligodendrocytes
c-17
Oligodendrocytes
c-18
Fibroblasts
c-19
Ependymal cells
c-20
Mural cells & vECs
c-21
Macrophages
c-22
Immature oligodendrocytes
c-23
Pericytes
c-24
NK-cells & T-cells
c-25
Oligodendrocyte progenitor ...
c-26
Vascular smooth muscle cell
c-27
Fibroblasts (BNC2+ KCNMA1+ ...
Show allShow less
This data was generated by Siletti K et al. (2023), re-processed by HPA (see methods) and simplified for global overview
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
268.3
Sample id
Sample description
nTPM
Basal amygdala nTPM: 235.5
2827
Female, age 67, right hemisphere
298.7
2609
Male, age 75, right hemisphere
270.9
2110
Male, age 80, left hemisphere
235.1
2685
Female, age 94, left hemisphere
224.6
2243
Female, age 91, right hemisphere
202.4
1955
Male, age 76, both hemispheres
181.3
Central amygdala nTPM: 262.8
2826
Female, age 94, left hemisphere
386.6
2515
Male, age 75, right hemisphere
313.0
1905
Male, age 76, both hemispheres
207.9
2239
Male, age 80, left hemisphere
207.8
2701
Female, age 91, right hemisphere
198.8
Corticomedial amygdala nTPM: 232.2
2428
Male, age 75, right hemisphere
307.4
2535
Female, age 67, right hemisphere
228.9
2829
Male, age 80, left hemisphere
226.9
2242
Female, age 91, right hemisphere
213.4
2240
Male, age 76, both hemispheres
211.9
2429
Female, age 94, left hemisphere
204.7
Lateral amygdala nTPM: 268.3
2830
Female, age 67, right hemisphere
389.1
2516
Male, age 75, right hemisphere
315.9
2534
Female, age 94, left hemisphere
303.6
2256
Male, age 80, left hemisphere
236.6
2255
Female, age 91, right hemisphere
188.1
1883
Male, age 76, both hemispheres
176.7
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1134.9
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 1134.9
Samples: 181
Max nTPM: 3988.3
Min nTPM: 534.5
Std nTPM: 443.0
Median nTPM: 1051.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
3988.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
3257.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
2905.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
2715.9
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
2550.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
2386.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
2294.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
1967.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
1873.9
GTEX-1RLM8-0011-R4a-SM-F2TBL
50-59 years, male
1717.8
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
1705.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
1679.4
GTEX-1PWST-0011-R4a-SM-F2T9X
70-79 years, male
1667.4
GTEX-11DYG-0011-R4b-SM-GJ3RG
60-69 years, male
1658.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
1627.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
1620.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
1619.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
1563.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
1543.1
GTEX-1RQED-0011-R4b-SM-F2I2X
60-69 years, male
1494.7
GTEX-1NV8Z-0011-R4b-SM-G8LMZ
60-69 years, male
1489.2
GTEX-15RJE-0011-R4a-SM-H7OH4
40-49 years, male
1473.8
GTEX-1LKK1-0011-R4b-SM-EY5YA
50-59 years, female
1457.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
1436.4
GTEX-1R46S-0011-R4b-SM-F2TBF
60-69 years, female
1368.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
1357.9
GTEX-1JMLX-0011-R4a-SM-EY5YJ
50-59 years, male
1345.8
GTEX-PVOW-0011-R4A-SM-H6Q8O
40-49 years, male
1340.8
GTEX-111FC-0011-R4a-SM-GIN8K
60-69 years, male
1334.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
1332.0
GTEX-13FHO-0011-R4b-SM-H6611
60-69 years, male
1327.3
GTEX-1117F-0011-R4b-SM-GI4VM
60-69 years, female
1326.7
GTEX-1JJ6O-0011-R4a-SM-EY5YM
60-69 years, male
1308.1
GTEX-1JMQK-0011-R4a-SM-G8LLQ
60-69 years, male
1298.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
1297.7
GTEX-13PLJ-0011-R4b-SM-GJ3R6
60-69 years, female
1270.7
GTEX-147F4-0011-R4b-SM-GJ3R4
50-59 years, male
1266.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
1264.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
1263.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
1254.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
1240.8
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
1231.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
1230.2
GTEX-1RDX4-0011-R4b-SM-F3K43
50-59 years, female
1227.2
GTEX-11ZTS-0011-R4b-SM-GINAQ
60-69 years, female
1226.6
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
1204.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
1195.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
1191.8
GTEX-11NV4-0011-R4a-SM-GI4XC
60-69 years, male
1190.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
1190.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
1185.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
1183.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
1177.8
GTEX-14BMV-0011-R4a-SM-H6Q7P
50-59 years, male
1175.7
GTEX-1P4AB-0011-R4b-SM-F2T9S
50-59 years, male
1174.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
1172.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
1166.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
1158.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
1149.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
1145.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
1142.9
GTEX-12WSC-0011-R4a-SM-H6Q8M
50-59 years, male
1142.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
1139.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
1138.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
1137.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
1135.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
1133.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
1124.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
1120.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
1117.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
1111.9
GTEX-14C5O-0011-R4b-SM-G9ERF
60-69 years, male
1109.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
1106.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
1104.9
GTEX-13QJC-0011-R4a-SM-H65ZP
60-69 years, female
1102.2
GTEX-11GSO-0011-R4b-SM-GJ3R8
60-69 years, male
1100.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
1100.9
GTEX-1LVA9-0011-R4a-SM-F2TA2
50-59 years, male
1100.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
1093.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
1087.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
1084.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
1078.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
1077.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
1075.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
1073.9
GTEX-11OF3-0011-R4a-SM-GJ3RB
60-69 years, male
1072.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
1065.2
GTEX-1MJK2-0011-R4a-SM-F3426
50-59 years, male
1060.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
1054.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
1051.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
1051.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
1050.3
GTEX-1LB8K-0011-R4b-SM-F6487
50-59 years, male
1044.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
1039.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
1035.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
1029.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
1025.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
1023.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
1022.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
1021.5
GTEX-11GS4-0011-R4a-SM-GJ3RJ
60-69 years, male
1020.2
GTEX-1QMI2-0011-R4b-SM-F3K4R
60-69 years, male
1017.1
GTEX-ZYY3-0011-R4a-SM-GQ1CY
60-69 years, female
1017.0
GTEX-1JN1M-0011-R4b-SM-F6494
60-69 years, female
1016.0
GTEX-11DXY-0011-R4b-SM-GI4VR
60-69 years, male
1011.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
1008.7
GTEX-1KWVE-0011-R4a-SM-F3K5X
30-39 years, male
1005.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
991.3
GTEX-12ZZY-0011-R4a-SM-GIN9F
60-69 years, male
991.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
986.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
985.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
984.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
980.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
980.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
972.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
966.2
GTEX-1LH75-0011-R4a-SM-F2TAM
50-59 years, female
961.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
954.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
949.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
943.3
GTEX-1PPGY-0011-R4a-SM-F3K4F
60-69 years, male
939.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
938.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
937.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
935.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
931.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
927.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
919.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
918.8
GTEX-117XS-0011-R4b-SM-GJ3PR
60-69 years, male
917.6
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
914.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
914.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
912.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
911.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
906.2
GTEX-145LU-0011-R4b-SM-5P9K1
50-59 years, male
903.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
899.1
GTEX-1O9I2-0011-R4b-SM-F3K4K
50-59 years, male
893.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
890.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
886.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
876.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
875.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
870.3
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
869.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
859.1
GTEX-1POEN-0011-R4b-SM-F3K4O
30-39 years, female
857.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
850.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
844.5
GTEX-1OJC4-0011-R4a-SM-F3K54
50-59 years, female
842.2
GTEX-1JMOU-0011-R4b-SM-EY5ZL
60-69 years, female
839.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
835.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
833.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
832.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
830.7
GTEX-1PIIG-0011-R4a-SM-F2TAQ
30-39 years, male
829.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
825.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
825.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
821.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
821.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
819.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
800.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
788.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
786.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
786.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
784.6
GTEX-ZZPT-0011-R4a-SM-GPRX4
50-59 years, male
763.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
750.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
745.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
739.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
725.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
720.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
711.3
GTEX-1RQEC-0011-R4b-SM-F342C
60-69 years, male
703.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
703.1
GTEX-1QP6S-0011-R4b-SM-F33ZY
40-49 years, male
697.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
681.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
644.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
641.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
633.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
632.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
591.8
GTEX-1N2EF-0011-R4a-SM-F341F
60-69 years, male
534.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
402.5
Macaque sample
Sample description
nTPM
Amygdala nTPM: 402.5
Samples: 2
Max nTPM: 409.5
Min nTPM: 395.5
Sample A
409.5
Sample B
395.5
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The Human Protein Atlas project is funded
