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CD99
BASAL GANGLIA - Expression summary
Protein expression
Caudatei
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:131.5 nTPM
HPA:131.5 nTPM
GTEx:145.0 nTPM
FANTOM5:142.4 Scaled Tags Per Million
Pig:2.3 nTPM

CAUDATE - Antibody stainingi
Antibody HPA035304Antibody CAB000020
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 131.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 131.5
2306 Female, age 91, right hemisphere 248.9
2301 Female, age 72, unknown 139.6
2302 Male, age 61, right hemisphere 137.6
2481 Female, age 94, left hemisphere 115.4
1854 Male, age 80, left hemisphere 114.5
1857 Female, age 85, left hemisphere 110.0
1781 Male, age 74, unknown 108.6
2846 Female, age 79, unknown 105.1
2713 Male, age 75, left hemisphere 104.0
Claustrum
nTPM: 110.4
2299 Female, age 85, both hemispheres 186.4
2307 Female, age 91, both hemispheres 143.2
2196 Female, age 79, unknown 101.4
2491 Male, age 75, both hemispheres 99.1
2198 Male, age 80, both hemispheres 98.7
1956 Male, age 74, unknown 97.0
2392 Female, age 94, both hemispheres 95.9
2568 Male, age 61, both hemispheres 86.7
2645 Female, age 72, unknown 85.5
Globus pallidus, externus
nTPM: 129.7
1996 Male, age 80, right hemisphere 180.0
2646 Male, age 61, right hemisphere 153.4
2395 Male, age 75, both hemispheres 136.1
2772 Female, age 79, unknown 130.8
2011 Female, age 91, left hemisphere 118.5
2644 Female, age 94, right hemisphere 113.8
2567 Female, age 72, unknown 106.5
2114 Female, age 85, right hemisphere 98.9
Globus pallidus, internus
nTPM: 125.2
2037 Male, age 80, right hemisphere 162.5
2483 Female, age 94, right hemisphere 138.6
1818 Male, age 74, unknown 135.1
2714 Male, age 75, right hemisphere 129.6
2111 Female, age 85, right hemisphere 119.6
2778 Female, age 91, both hemispheres 112.7
2566 Female, age 72, unknown 109.2
1997 Male, age 61, left hemisphere 94.0
Nucleus accumbens
nTPM: 118.1
2305 Male, age 75, left hemisphere 168.3
2732 Male, age 80, right hemisphere 136.4
2698 Female, age 72, unknown 117.5
2391 Female, age 94, left hemisphere 112.1
1806 Female, age 85, left hemisphere 107.9
1783 Male, age 74, unknown 102.1
1856 Female, age 91, right hemisphere 100.9
2824 Male, age 61, right hemisphere 99.3
Nucleus basalis of Meynert
nTPM: 125.4
2569 Male, age 61, both hemispheres 164.4
2842 Male, age 74, unknown 163.6
2393 Male, age 80, right hemisphere 130.1
2484 Female, age 94, left hemisphere 108.7
2821 Male, age 75, both hemispheres 108.7
2300 Female, age 85, both hemispheres 104.3
2200 Female, age 91, left hemisphere 97.9
Nucleus of the diagonal band
nTPM: 105.7
1812 Female, age 91, both hemispheres 131.4
1979 Male, age 74, unknown 108.8
2775 Male, age 80, right hemisphere 103.5
2029 Male, age 61, right hemisphere 93.4
2195 Female, age 85, both hemispheres 91.3
Olfactory tubercle
nTPM: 103.9
1846 Male, age 80, right hemisphere 123.9
2856 Male, age 75, right hemisphere 106.5
2487 Female, age 94, left hemisphere 97.1
1998 Female, age 91, both hemispheres 88.1
Putamen
nTPM: 116.2
2490 Male, age 61, left hemisphere 154.3
2488 Female, age 85, left hemisphere 149.3
2482 Female, age 94, left hemisphere 122.4
1829 Male, age 74, unknown 115.0
1838 Male, age 80, right hemisphere 105.3
2489 Female, age 72, unknown 103.1
2647 Male, age 75, left hemisphere 101.2
1937 Female, age 91, right hemisphere 99.5
2466 Female, age 79, unknown 95.9
Septal nuclei
nTPM: 116.7
2629 Female, age 94, right hemisphere 141.7
2199 Male, age 80, right hemisphere 138.1
2009 Female, age 91, both hemispheres 122.8
2394 Male, age 61, left hemisphere 117.3
2059 Female, age 85, both hemispheres 107.9
1960 Male, age 74, unknown 95.8
2031 Female, age 72, unknown 93.1

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 145.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 133.2
Samples: 246

Max nTPM: 493.9
Min nTPM: 22.6
Std nTPM: 73.7
Median nTPM: 115.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 493.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 441.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 403.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 356.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 352.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 344.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 339.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 334.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 323.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 322.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 308.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 145.0
Samples: 246

Max nTPM: 517.4
Min nTPM: 25.9
Std nTPM: 84.1
Median nTPM: 125.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 517.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 462.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 435.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 416.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 414.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 412.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 402.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 380.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 361.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 346.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 328.7
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Brain - Putamen (basal ganglia)
Average nTPM: 133.3
Samples: 205

Max nTPM: 524.8
Min nTPM: 26.0
Std nTPM: 75.3
Median nTPM: 117.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 524.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 499.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 475.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 350.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 329.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 322.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 319.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 281.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 275.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 254.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 253.2
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 142.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 142.4
FF:10164-103B2 76 years, female 142.4
Nucleus accumbens
Scaled Tags Per Million: 0.0
FF:10037-101F1 23-56 years, mixed 0.0
Putamen
Scaled Tags Per Million: 61.3
FF:10176-103C5 60 years, female 61.3

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 2.3
Pig sample Sample description nTPM
Caudate
nTPM: 2.3
Samples: 4

Max nTPM: 2.6
Min nTPM: 2.1
Sample A Female 2.6
Sample B Female 2.3
Sample C Male 2.1
Sample D Male 2.1
Putamen
nTPM: 1.7
Samples: 4

Max nTPM: 2.2
Min nTPM: 1.0
Sample A Female 2.2
Sample B Female 1.8
Sample C Male 1.0
Sample D Male 1.7
Septum
nTPM: 2.1
Samples: 4

Max nTPM: 2.2
Min nTPM: 1.8
Sample A Female 2.2
Sample B Female 1.8
Sample C Male 2.2
Sample D Male 2.1
Ventral pallidum
nTPM: 1.8
Samples: 4

Max nTPM: 2.0
Min nTPM: 1.6
Sample A Female 1.9
Sample B Female 1.6
Sample C Male 1.6
Sample D Male 2.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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