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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
211.4
nTPM
Monaco:
546.4
nTPM
Schmiedel:
244.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
211.4
HPA sample
nTPM
gdT-cell nTPM: 177.9
Samples: 6
Max nTPM: 230.4
Min nTPM: 114.9
P10809_1007
114.9
P10809_1022
214.6
P10809_1041
230.4
P10809_1060
169.2
P10809_1077
178.9
P10809_1098
159.6
MAIT T-cell nTPM: 202.0
Samples: 6
Max nTPM: 248.2
Min nTPM: 152.1
P10809_1006
165.2
P10809_1024
248.2
P10809_1043
233.1
P10809_1062
186.3
P10809_1083
152.1
P10809_1097
226.9
Memory CD4 T-cell nTPM: 211.5
Samples: 6
Max nTPM: 249.9
Min nTPM: 174.8
P10809_1014
174.8
P10809_1026
219.0
P10809_1045
232.6
P10809_1064
190.3
P10809_1086
249.9
P10809_1113
202.1
Memory CD8 T-cell nTPM: 195.6
Samples: 5
Max nTPM: 220.0
Min nTPM: 175.1
P10809_1012
175.1
P10809_1027
187.8
P10809_1046
220.0
P10809_1065
202.4
P10809_1111
192.5
Naive CD4 T-cell nTPM: 153.3
Samples: 6
Max nTPM: 172.6
Min nTPM: 124.1
P10809_1015
124.1
P10809_1030
150.7
P10809_1049
163.5
P10809_1068
164.9
P10809_1085
172.6
P10809_1112
143.9
Naive CD8 T-cell nTPM: 171.2
Samples: 6
Max nTPM: 198.2
Min nTPM: 110.8
P10809_1016
110.8
P10809_1031
197.8
P10809_1050
172.4
P10809_1069
198.2
P10809_1087
197.1
P10809_1110
150.9
T-reg nTPM: 182.9
Samples: 6
Max nTPM: 258.4
Min nTPM: 131.4
P10809_1018
141.0
P10809_1037
190.8
P10809_1056
258.4
P10809_1075
131.4
P10809_1094
223.5
P10809_1106
152.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
546.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 475.9
Samples: 4
Max nTPM: 519.4
Min nTPM: 439.4
RHH5202_R3573
501.4
RHH5230_R3602
443.2
RHH5259_R3631
439.4
RHH5288_R3660
519.4
Effector memory CD8 T-cell nTPM: 538.1
Samples: 4
Max nTPM: 667.5
Min nTPM: 417.2
RHH5203_R3574
667.5
RHH5231_R3603
417.2
RHH5260_R3632
503.1
RHH5289_R3661
564.7
MAIT T-cell nTPM: 420.8
Samples: 4
Max nTPM: 511.5
Min nTPM: 363.7
RHH5233_R3605
422.7
RHH5205_R3576
511.5
RHH5262_R3634
385.2
RHH5297_R3663
363.7
Memory CD4 T-cell TFH nTPM: 454.0
Samples: 4
Max nTPM: 541.7
Min nTPM: 391.4
RHH5300_R3666
391.4
RHH5236_R3608
465.5
RHH5265_R3637
417.5
RHH5208_R3579
541.7
Memory CD4 T-cell Th1 nTPM: 425.8
Samples: 4
Max nTPM: 484.0
Min nTPM: 367.0
RHH5210_R3581
413.6
RHH5302_R3668
484.0
RHH5238_R3610
367.0
RHH5267_R3639
438.4
Memory CD4 T-cell Th1/Th17 nTPM: 546.5
Samples: 4
Max nTPM: 596.9
Min nTPM: 433.6
RHH5303_R3669
573.5
RHH5211_R3582
596.9
RHH5239_R3611
581.9
RHH5268_R3640
433.6
Memory CD4 T-cell Th17 nTPM: 545.8
Samples: 4
Max nTPM: 606.5
Min nTPM: 463.6
RHH5304_R3670
597.3
RHH5212_R3583
515.7
RHH5240_R3612
606.5
RHH5269_R3641
463.6
Memory CD4 T-cell Th2 nTPM: 541.1
Samples: 4
Max nTPM: 656.1
Min nTPM: 454.9
RHH5305_R3671
525.6
RHH5213_R3584
656.1
RHH5241_R3613
454.9
RHH5270_R3642
527.7
Naive CD4 T-cell nTPM: 345.2
Samples: 4
Max nTPM: 376.3
Min nTPM: 327.4
RHH5306_R3672
330.2
RHH5214_R3585
376.3
RHH5242_R3614
327.4
RHH5271_R3643
346.8
Naive CD8 T-cell nTPM: 337.8
Samples: 4
Max nTPM: 407.8
Min nTPM: 256.5
RHH5201_R3572
407.8
RHH5229_R3601
339.1
RHH5258_R3630
256.5
RHH5287_R3659
347.8
Non-Vd2 gdTCR nTPM: 487.9
Samples: 4
Max nTPM: 552.7
Min nTPM: 394.1
RHH5235_R3607
541.3
RHH5264_R3636
463.6
RHH5207_R3578
552.7
RHH5299_R3665
394.1
T-reg nTPM: 412.4
Samples: 4
Max nTPM: 466.5
Min nTPM: 360.9
RHH5301_R3667
360.9
RHH5237_R3609
420.8
RHH5266_R3638
401.2
RHH5209_R3580
466.5
Terminal effector memory CD4 T-cell nTPM: 419.9
Samples: 2
Max nTPM: 436.9
Min nTPM: 402.8
RHH5243_R3615
436.9
RHH5272_R3644
402.8
Terminal effector memory CD8 T-cell nTPM: 465.8
Samples: 4
Max nTPM: 488.0
Min nTPM: 415.3
RHH5232_R3604
475.5
RHH5204_R3575
415.3
RHH5261_R3633
488.0
RHH5296_R3662
484.4
Vd2 gdTCR nTPM: 360.9
Samples: 4
Max nTPM: 405.2
Min nTPM: 284.3
RHH5234_R3606
383.7
RHH5206_R3577
370.5
RHH5263_R3635
405.2
RHH5298_R3664
284.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.