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MTMR7
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TISSUE SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:5.8 nTPM
HPA:5.8 nTPM
GTEx:11.5 nTPM
FANTOM5:19.8 Scaled Tags Per Million
Pig:22.4 nTPM

SPINAL CORD - Annotated protein expression
Pending normal tissue analysis

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 5.8
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 3.1
2194 Female, age 79, both hemispheres 3.8
2048 Male, age 55, midline 3.7
1981 Female, age 72, midline 3.5
2816 Male, age 47, midline 3.1
2565 Male, age 75, midline 1.2
Cervical spinal cord, dorsal horn
nTPM: 5.8
2296 Male, age 66, both hemispheres 12.4
2173 Female, age 72, unknown 7.6
2069 Male, age 47, both hemispheres 5.0
2297 Male, age 75, both hemispheres 4.6
1877 Male, age 55, unknown 4.0
2721 Male, age 90, both hemispheres 1.2
Cervical spinal cord, ventral horn
nTPM: 3.7
2068 Male, age 55, unknown 5.5
2820 Female, age 79, both hemispheres 5.0
2480 Male, age 75, both hemispheres 4.8
2295 Male, age 66, both hemispheres 3.1
2098 Female, age 72, unknown 3.0
2809 Male, age 90, both hemispheres 0.8

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 11.5
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 11.5
Samples: 159

Max nTPM: 31.4
Min nTPM: 1.1
Std nTPM: 4.6
Median nTPM: 11.0
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 31.4
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 26.2
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 21.2
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 21.0
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 20.8
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 20.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 20.2
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 18.8
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 18.7
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 18.5
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 18.2
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 17.8
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 17.8
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 17.6
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 17.5
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 17.4
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 17.0
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 16.9
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 16.8
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 16.6
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 16.4
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 16.3
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 16.1
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 16.0
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 16.0
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 16.0
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 15.9
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 15.8
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 15.6
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 15.6
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 15.4
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 15.4
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 15.3
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 15.2
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 15.1
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 15.1
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 15.1
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 15.1
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 15.0
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 15.0
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 15.0
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 14.9
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 14.8
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 14.3
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 14.3
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 14.2
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 14.0
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 13.7
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 13.7
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 13.6
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 13.6
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 13.4
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 13.4
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 13.4
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 13.4
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 13.3
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 13.1
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 12.9
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 12.9
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 12.6
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 12.5
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 12.4
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 12.4
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 12.4
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 12.3
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 12.3
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 12.0
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 12.0
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 11.9
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 11.7
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 11.6
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 11.5
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 11.4
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 11.3
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 11.2
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 11.2
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 11.1
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 11.1
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 11.1
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 11.0
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 11.0
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 11.0
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 10.8
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 10.5
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 10.3
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 10.3
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 10.1
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 10.0
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 10.0
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 9.9
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 9.9
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 9.8
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 9.7
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 9.6
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 9.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 9.4
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 9.2
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 9.2
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 9.1
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 9.1
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 9.0
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 9.0
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 9.0
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 8.9
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 8.9
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 8.8
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 8.8
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 8.8
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 8.7
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 8.5
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 8.5
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 8.4
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 8.3
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 8.2
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 8.2
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 8.1
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 8.1
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 8.0
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 7.9
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 7.9
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 7.8
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 7.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 7.7
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 7.7
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 7.7
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 7.7
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 7.6
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 7.5
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 7.4
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 7.4
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 7.4
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 7.4
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 7.3
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 7.2
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 7.1
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 7.1
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 7.1
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 6.9
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 6.8
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 6.8
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 6.8
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 6.7
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 6.7
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 6.6
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 6.6
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 6.4
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 6.1
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 6.1
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 5.7
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 5.0
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 4.8
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 4.8
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 4.6
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 4.4
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 4.2
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 3.5
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 3.1
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 2.8
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 1.1
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 19.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 19.8
FF:10181-103D1 60 years, female 23.3
FF:10159-103A6 76 years, female 16.4

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 22.4
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 20.2
Samples: 4

Max nTPM: 23.8
Min nTPM: 16.4
Sample A Female 23.8
Sample B Female 16.4
Sample C Male 19.4
Sample D Male 21.2
Ventral spinal cord
nTPM: 22.4
Samples: 4

Max nTPM: 24.5
Min nTPM: 19.7
Sample A Female 24.5
Sample B Female 19.7
Sample C Male 21.0
Sample D Male 24.5

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