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SLC7A2
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TISSUE RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
Dictionary
Tissue proteome
Eye
Retina
RETINA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:17.6 nTPM
GTEx:17.6 nTPM
FANTOM5:57.8 Scaled Tags Per Million
Pig:2.9 nTPM
Mouse:9.0 nTPM

RETINA - Annotated protein expression
Pending normal tissue analysis

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 17.6
GTEx sample id Sample description nTPM
Retina
Average nTPM: 17.6
Samples: 105

Max nTPM: 32.3
Min nTPM: 9.9
Std nTPM: 4.3
Median nTPM: 0.0
415_1 77 years, female 32.3
142_1 61 years, female 29.6
43_1 64 years, female 28.0
495_1 57 years, female 26.9
414_1 84 years, female 25.8
139_1 64 years, female 25.4
490_1 67 years, female 25.2
266_1 85 years, male 24.9
89_1 63 years, male 24.7
162_1 79 years, female 24.7
137_1 83 years, male 24.6
119_1 70 years, female 23.9
117_1 61 years, male 23.8
32_1 67 years, male 23.4
6_1 73 years, female 21.5
251_1 78 years, male 21.5
17_1 71 years, male 21.4
503_1 68 years, male 21.3
35_1 74 years, female 21.0
18_1 88 years, male 20.6
308_1 70 years, female 20.6
352_1 62 years, male 20.4
466_1 57 years, female 20.3
217_1 76 years, male 20.2
173_1 67 years, male 20.1
468_1 89 years, male 19.9
316_1 62 years, male 19.8
425_1 59 years, female 19.8
526_1 61 years, male 19.8
491_1 89 years, female 19.7
324_1 76 years, male 19.6
149_1 88 years, male 19.5
265_1 87 years, male 19.4
313_1 79 years, female 19.3
115_1 83 years, male 18.9
246_1 77 years, male 18.8
350_1 84 years, female 18.5
375_1 74 years, female 18.5
109_1 81 years, female 18.4
389_1 86 years, female 18.4
405_1 91 years, male 18.4
348_1 84 years, male 18.2
413_1 59 years, female 18.0
355_1 70 years, female 17.6
9_1 66 years, female 17.5
177_1 74 years, male 17.4
311_1 78 years, male 17.4
315_1 62 years, female 17.4
335_1 73 years, female 17.3
229_1 69 years, female 17.2
347_1 72 years, male 17.1
163_1 78 years, male 17.0
354_1 81 years, female 16.9
286_1 68 years, female 16.7
518_1 75 years, female 16.7
81_1 67 years, male 16.6
396_1 62 years, male 16.6
499_1 55 years, female 16.6
99_1 64 years, male 16.5
120_1 70 years, female 16.5
377_1 82 years, female 16.4
517_1 88 years, male 16.3
2_1 77 years, female 16.0
254_1 77 years, female 16.0
317_1 60 years, male 15.8
321_1 62 years, female 15.8
42_1 85 years, male 15.7
386_1 76 years, male 15.6
318_1 68 years, male 15.5
243_1 75 years, male 15.4
480_1 63 years, male 15.3
172_1 72 years, female 15.2
153_1 70 years, female 15.1
322_1 76 years, male 14.9
126_1 63 years, male 14.7
376_1 75 years, female 14.7
406_1 79 years, male 14.7
292_1 71 years, male 14.6
501_1 88 years, male 14.6
379_1 60 years, male 14.5
218_1 71 years, female 14.4
394_1 75 years, female 14.4
307_1 66 years, female 14.3
404_1 82 years, female 14.3
291_1 76 years, male 14.0
293_1 68 years, female 14.0
189_1 76 years, male 13.8
295_1 61 years, female 13.5
237_1 82 years, male 13.1
145_1 84 years, male 13.0
314_1 67 years, male 12.9
288_1 66 years, female 12.8
356_1 87 years, female 12.8
351_1 91 years, male 12.2
353_1 82 years, female 12.2
447_1 81 years, male 12.2
264_1 73 years, female 12.1
384_1 83 years, male 11.9
349_1 83 years, male 11.6
506_1 65 years, male 11.6
452_1 88 years, female 11.5
319_1 81 years, male 11.0
320_1 89 years, female 10.8
41_1 94 years, female 10.4
4_1 88 years, female 9.9
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 57.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 57.8
FF:10030-101E3 24-65 years, mixed 57.8

RETINA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 2.9
Pig sample Sample description nTPM
Retina
nTPM: 2.8
Samples: 4

Max nTPM: 3.1
Min nTPM: 2.3
Sample A Female 2.9
Sample B Female 3.0
Sample C Male 3.1
Sample D Male 2.3

RETINA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 9.0
Mouse sample Sample description nTPM
Retina
nTPM: 9.0
Samples: 4

Max nTPM: 12.8
Min nTPM: 5.8
Sample A Male 12.8
Sample B Male 7.0
Sample C Female 5.8
Sample D Female 10.2

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by the Knut & Alice Wallenberg Foundation.