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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 40.6
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 8.6
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 11.0
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 41.5
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 28.9
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 65.9
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 30.6
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 63.0
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 62.3
Min RPKM: 13.2
Std RPKM: 7.7
Median RPKM: 34.1
GTEX-13SLX-1226-SM-5S2Q6
62.3
GTEX-1497J-0726-SM-5Q5D1
57.7
GTEX-REY6-1226-SM-48FDR
54.0
GTEX-X4EP-1026-SM-4QAS5
51.1
GTEX-13N11-0926-SM-5IJG2
50.8
GTEX-13NZ9-1326-SM-5MR3V
50.8
GTEX-YECK-1926-SM-4W21H
48.5
GTEX-YB5E-0326-SM-5IFHU
46.9
GTEX-13QJC-0726-SM-5RQJK
45.9
GTEX-XOTO-0826-SM-4B65O
45.7
GTEX-ZVT3-1626-SM-5GU66
45.5
GTEX-UPIC-0926-SM-4IHLV
44.1
GTEX-145MF-0826-SM-5QGQA
43.9
GTEX-139TU-0826-SM-5IJFG
42.1
GTEX-14DAQ-1726-SM-5S2R2
42.1
GTEX-T6MN-1226-SM-3NMA5
42.0
GTEX-12WSD-1426-SM-5GCN9
41.9
GTEX-11NUK-1226-SM-5P9GM
41.4
GTEX-1399T-0826-SM-5IFES
40.8
GTEX-11ZTS-1426-SM-5EQMM
40.6
GTEX-RN64-1826-SM-48FDV
40.5
GTEX-Y5LM-0426-SM-4VBRO
40.5
GTEX-PX3G-0826-SM-48TZS
40.4
GTEX-11GSP-0626-SM-5986T
40.3
GTEX-RTLS-1326-SM-46MUN
40.3
GTEX-139TS-1426-SM-5IFJD
40.2
GTEX-1212Z-0226-SM-59HLF
40.2
GTEX-147JS-1126-SM-5RQIW
40.2
GTEX-UTHO-2426-SM-4JBHD
40.1
GTEX-ZVT4-0626-SM-5E45T
40.1
GTEX-RWSA-1426-SM-47JXA
40.0
GTEX-147F4-1426-SM-5LUA8
39.4
GTEX-ZAB4-0826-SM-5LU9D
38.9
GTEX-145LU-1326-SM-5LU9N
38.1
GTEX-ZTPG-1426-SM-51MT3
38.0
GTEX-ZYT6-0626-SM-5E45V
37.2
GTEX-11WQC-0726-SM-5EQMR
37.1
GTEX-YFC4-1526-SM-5IFJS
36.7
GTEX-13NYB-1026-SM-5IFH3
36.7
GTEX-RU72-1426-SM-46MUF
36.7
GTEX-13O3O-1826-SM-5IFGW
36.7
GTEX-12WSG-0626-SM-5FQTQ
36.2
GTEX-13NZB-0626-SM-5IFH6
36.2
GTEX-SJXC-1226-SM-4DM78
36.1
GTEX-X4EO-1126-SM-4QARQ
35.6
GTEX-S33H-1626-SM-4AD68
35.6
GTEX-QEL4-1226-SM-447A4
35.5
GTEX-11NV4-1326-SM-5HL6V
35.5
GTEX-ZYY3-0626-SM-5NQ6W
35.5
GTEX-11ZUS-2526-SM-59872
35.3
GTEX-XBEC-1526-SM-4AT68
35.2
GTEX-QESD-2026-SM-447BI
34.9
GTEX-Q2AG-1126-SM-48U1P
34.9
GTEX-13113-1326-SM-5GCOI
34.8
GTEX-13OW6-2626-SM-5IFF2
34.7
GTEX-WZTO-0626-SM-4PQYY
34.6
GTEX-QEG4-1826-SM-4R1JN
34.4
GTEX-X261-1726-SM-4PQYT
34.2
GTEX-Y5V5-0926-SM-4VBPZ
34.2
GTEX-13VXU-0926-SM-5IFFH
34.1
GTEX-WYVS-1926-SM-4PQZ2
34.1
GTEX-P78B-1326-SM-3P611
34.0
GTEX-WFON-1726-SM-4LVMQ
34.0
GTEX-13FTZ-0726-SM-5IFFY
33.9
GTEX-14AS3-0126-SM-5Q5F4
33.8
GTEX-11DXZ-0126-SM-5EGGY
33.8
GTEX-131YS-1626-SM-5HL6C
33.6
GTEX-QDVN-0826-SM-48TZ2
33.6
GTEX-14A5I-1726-SM-5QGQ5
32.9
GTEX-12KS4-1326-SM-5LUB3
32.9
GTEX-12WSI-0226-SM-5GCNA
32.8
GTEX-14C38-1526-SM-5RQJ7
32.5
GTEX-13112-1426-SM-5EGH8
32.5
GTEX-13FLV-0326-SM-5N9DJ
32.0
GTEX-X4XY-1626-SM-46MVN
32.0
GTEX-11EQ9-0526-SM-5A5JZ
32.0
GTEX-11DXY-0526-SM-5EGGQ
31.8
GTEX-145MO-2326-SM-5NQ9K
31.7
GTEX-Q734-0326-SM-48U15
31.7
GTEX-13FTW-1126-SM-5J2NV
31.7
GTEX-14753-1626-SM-5NQ9L
31.3
GTEX-12WSM-0726-SM-5GCOW
31.2
GTEX-S32W-1926-SM-4AD63
31.2
GTEX-11OF3-0726-SM-5BC4Z
30.9
GTEX-ZF29-2026-SM-4WWB7
30.8
GTEX-11ZVC-0726-SM-5FQT9
30.4
GTEX-12696-0826-SM-5EGGE
30.2
GTEX-139YR-0226-SM-5IFEM
29.9
GTEX-OOBJ-0826-SM-3NB2K
29.8
GTEX-144GM-1326-SM-5LU5E
29.7
GTEX-ZF2S-3026-SM-4WWCH
29.6
GTEX-13PVR-0126-SM-5S2PY
29.3
GTEX-RNOR-1426-SM-48FDJ
29.2
GTEX-ZVP2-0626-SM-51MSO
29.2
GTEX-R53T-0326-SM-48FEC
29.2
GTEX-ZZPU-0426-SM-5GZYH
28.9
GTEX-13N2G-0926-SM-5IFGJ
28.4
GTEX-131XH-0626-SM-5LZWH
28.4
GTEX-QV44-0326-SM-4R1KD
28.3
GTEX-WQUQ-1926-SM-4OOSA
27.7
GTEX-1399R-1226-SM-5P9GF
27.0
GTEX-RM2N-1926-SM-48FCU
27.0
GTEX-UPK5-1426-SM-4JBHH
26.9
GTEX-TKQ2-1726-SM-4DXUP
26.8
GTEX-14E1K-0326-SM-5S2PE
26.6
GTEX-ZAB5-0426-SM-5CVMI
26.5
GTEX-S4Z8-0526-SM-4AD4T
26.3
GTEX-1269C-0626-SM-5FQSS
26.1
GTEX-146FH-1526-SM-5NQBU
25.5
GTEX-VUSG-0126-SM-4KL1X
25.4
GTEX-131XE-0326-SM-5LZVO
24.9
GTEX-X3Y1-2726-SM-4PQZH
24.5
GTEX-Z9EW-0426-SM-5CVM9
24.0
GTEX-ZPU1-0826-SM-57WG2
23.6
GTEX-YEC4-0826-SM-5P9FV
22.7
GTEX-12WSL-0226-SM-5CVMJ
21.9
GTEX-U3ZN-0226-SM-3DB8D
20.7
GTEX-132NY-0926-SM-5P9G3
17.0
GTEX-12ZZZ-1326-SM-59HKW
13.2
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
Female, age 60
Male, age 54
Male, age 74
Female, age 62 
Male, age 78 
Male, age 53 
Male, age 77 
Female, age 72 
Male, age 70 
Female, age 23 
