HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:1.0 nTPM
HPA Brain:38.3 nTPM
GTEx:1.0 nTPM
FANTOM5:5.0 Scaled Tags Per Million
Pig:42.6 nTPM
Mouse:16.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000942
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.3
Sample id Sample description nTPM
Hippocampus
nTPM: 31.8
2621 Female, age 67, right hemisphere 46.8
1898 Male, age 80, left hemisphere 34.3
2148 Female, age 91, left hemisphere 33.3
1855 Male, age 76, left hemisphere 25.8
1911 Female, age 85, right hemisphere 25.8
2529 Female, age 94, left hemisphere 24.9
Dentate gyrus
nTPM: 32.0
1927 Female, age 91, both hemispheres 41.0
2531 Female, age 67, both hemispheres 35.4
2530 Female, age 94, left hemisphere 32.4
2246 Female, age 85, both hemispheres 29.7
2528 Male, age 74, both hemispheres 28.1
2010 Male, age 76, both hemispheres 25.4
Entorhinal gyrus
nTPM: 37.6
2613 Female, age 94, left hemisphere 64.1
2686 Male, age 75, right hemisphere 37.9
2764 Male, age 80, right hemisphere 36.8
1938 Female, age 85, left hemisphere 34.2
1787 Male, age 76, left hemisphere 33.9
2117 Female, age 91, right hemisphere 19.1
Hippocampus, CA1
nTPM: 36.0
2749 Male, age 80, left hemisphere 58.6
2527 Male, age 74, both hemispheres 38.2
1873 Female, age 85, both hemispheres 32.3
2045 Male, age 76, both hemispheres 25.7
2082 Female, age 91, right hemisphere 24.9
Hippocampus, CA2
nTPM: 33.0
1963 Male, age 80, left hemisphere 42.9
2437 Female, age 94, left hemisphere 40.1
1892 Male, age 76, both hemispheres 35.9
2249 Male, age 74, both hemispheres 29.1
2113 Female, age 91, right hemisphere 25.5
1940 Female, age 85, left hemisphere 24.5
Hippocampus, CA3
nTPM: 36.0
2861 Female, age 67, both hemispheres 47.0
2137 Male, age 80, left hemisphere 41.9
2620 Female, age 94, left hemisphere 39.5
2436 Male, age 74, both hemispheres 31.5
1867 Male, age 76, both hemispheres 30.3
1891 Female, age 85, both hemispheres 25.5
Parahippocampal cortex
nTPM: 37.6
2622 Female, age 67, right hemisphere 44.0
2693 Female, age 94, both hemispheres 43.3
2245 Female, age 91, both hemispheres 42.7
2250 Female, age 67, right hemisphere 41.4
1990 Female, age 91, right hemisphere 41.2
2692 Male, age 74, both hemispheres 37.3
1850 Male, age 80, both hemispheres 35.2
2532 Female, age 72, left hemisphere 34.1
1933 Female, age 85, both hemispheres 33.0
2018 Male, age 76, both hemispheres 23.7
Perirhinal gyrus
nTPM: 38.3
1847 Female, age 91, left hemisphere 49.1
2521 Female, age 94, right hemisphere 45.7
1794 Male, age 80, right hemisphere 35.4
1841 Female, age 85, right hemisphere 33.0
2848 Male, age 76, right hemisphere 28.2
Subiculum
nTPM: 29.9
2438 Female, age 94, left hemisphere 40.1
2619 Male, age 74, both hemispheres 36.8
1977 Female, age 85, both hemispheres 31.4
1901 Male, age 80, both hemispheres 31.2
2729 Female, age 91, right hemisphere 22.1
2042 Male, age 76, both hemispheres 17.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1.0
Samples: 197

Max nTPM: 5.4
Min nTPM: 0.0
Std nTPM: 1.1
Median nTPM: 0.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 5.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 5.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 4.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 4.6
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 4.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 4.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 4.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 4.1
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 4.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 3.9
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 3.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 5.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 5.0
FF:10153-102I9 76 years, female 6.9
FF:10169-103B7 60 years, female 3.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.6
Pig sample Sample description nTPM
Subiculum
nTPM: 26.2
Samples: 4

Max nTPM: 34.7
Min nTPM: 22.5
Sample A Female 34.7
Sample B Female 22.5
Sample C Male 23.8
Sample D Male 23.9
Dorsal hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 17.6
Min nTPM: 15.3
Sample A Female 17.3
Sample B Female 17.6
Sample C Male 17.4
Sample D Male 15.3
Entorhinal cortex
nTPM: 42.6
Samples: 4

Max nTPM: 49.2
Min nTPM: 40.2
Sample A Female 40.2
Sample B Female 40.2
Sample C Male 49.2
Sample D Male 40.6
Ventral hippocampus
nTPM: 18.5
Samples: 4

Max nTPM: 25.0
Min nTPM: 13.7
Sample A Female 13.7
Sample B Female 15.1
Sample C Male 25.0
Sample D Male 20.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.0
Samples: 4

Max nTPM: 22.2
Min nTPM: 12.4
Sample A Male 13.4
Sample B Male 16.0
Sample C Female 12.4
Sample D Female 22.2
Hippocampal formation
nTPM: 7.0
Samples: 4

Max nTPM: 8.1
Min nTPM: 5.6
Sample A Male 8.1
Sample B Male 6.9
Sample C Female 5.6
Sample D Female 7.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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