AGK

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:7.7 FPKM
GTEx:6.0 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA020959

 

Antibody HPA053471

 

Endothelial cells

Not detected   Low  

Glandular cells

Not detected   Medium  

Peripheral nerve/ganglion

Medium   Medium  
   
   

COLON - HPA RNA-seq

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Average FPKM

7.7

overview Male, age 54
Sample 1
FPKM: 5.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 8.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 6.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 3.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 6.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 9.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 13.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

6.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 6.2
Samples: 149

Max RPKM: 9.9
Min RPKM: 3.3
Std RPKM: 1.3
Median RPKM: 6
GTEX-13PVQ-2726-SM-5L3H7 9.9
GTEX-14E6C-2226-SM-5QGQG 9.7
GTEX-13OW6-2226-SM-5N9FL 9.6
GTEX-14A5I-2426-SM-5Q5CP 9.3
GTEX-13X6K-2726-SM-5O9DG 9.2
GTEX-ZYY3-2226-SM-5E45A 9.0
GTEX-X4EO-2726-SM-4E3HS 8.4
GTEX-148VJ-2426-SM-5NQ9Y 8.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 5.9
Samples: 196

Max RPKM: 9.1
Min RPKM: 1.4
Std RPKM: 1.1
Median RPKM: 6
GTEX-147JS-2526-SM-5S2Q8 9.1
GTEX-U3ZH-1326-SM-4DXSF 9.0
GTEX-12KS4-2426-SM-5LU8P 9.0
GTEX-13FHP-2426-SM-5KLZ5 8.8
GTEX-1128S-1626-SM-5H12O 8.6
GTEX-ZYFC-2626-SM-5NQ6S 8.5
GTEX-111VG-2226-SM-5N9DU 8.3
GTEX-133LE-1526-SM-5IFEN 8.2
Show all