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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:6.8 nTPM
HPA:6.8 nTPM
GTEx:13.6 nTPM
FANTOM5:4.7 Scaled Tags Per Million
Pig:0.6 nTPM
Mouse:0.2 nTPM
Allen mouse:0.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA027398Antibody HPA027492Antibody HPA028033Antibody CAB013690
Glial cells Not detectedNot detectedNot detectedLow
Neuronal cells LowLowNot detectedNot detected









BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 6.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 5.2
2288 Male, age 75, left hemisphere 11.3
2289 Male, age 61, right hemisphere 7.4
2481 Female, age 94, left hemisphere 7.4
2846 Female, age 79, unknown 5.4
1854 Male, age 80, left hemisphere 3.1
1781 Male, age 74, unknown 2.8
2290 Female, age 72, unknown 2.7
1857 Female, age 85, left hemisphere 1.7
Claustrum
nTPM: 3.2
2568 Male, age 61, both hemispheres 5.0
1956 Male, age 74, unknown 3.7
2645 Female, age 72, unknown 3.3
2198 Male, age 80, both hemispheres 3.2
2392 Female, age 94, both hemispheres 3.2
2491 Male, age 75, both hemispheres 3.1
2196 Female, age 79, unknown 2.9
2284 Female, age 91, both hemispheres 2.3
2292 Female, age 85, both hemispheres 2.1
Globus pallidus, externus
nTPM: 6.5
2646 Male, age 61, right hemisphere 8.1
2395 Male, age 75, both hemispheres 7.0
2772 Female, age 79, unknown 7.0
2567 Female, age 72, unknown 6.4
1996 Male, age 80, right hemisphere 4.1
Globus pallidus, internus
nTPM: 5.2
2111 Female, age 85, right hemisphere 8.0
2483 Female, age 94, right hemisphere 6.9
2778 Female, age 91, both hemispheres 5.9
2287 Male, age 75, right hemisphere 5.5
2566 Female, age 72, unknown 4.1
1818 Male, age 74, unknown 3.1
2037 Male, age 80, right hemisphere 3.0
Nucleus accumbens
nTPM: 3.0
2286 Male, age 75, left hemisphere 7.9
2391 Female, age 94, left hemisphere 5.1
2732 Male, age 80, right hemisphere 2.6
1783 Male, age 74, unknown 2.2
2698 Female, age 72, unknown 2.1
2824 Male, age 61, right hemisphere 1.7
1806 Female, age 85, left hemisphere 1.6
1856 Female, age 91, right hemisphere 0.5
Nucleus basalis of Meynert
nTPM: 6.1
2569 Male, age 61, both hemispheres 6.9
2484 Female, age 94, left hemisphere 6.4
2393 Male, age 80, right hemisphere 6.2
2821 Male, age 75, both hemispheres 4.9
Nucleus of the diagonal band
nTPM: 1.6
1812 Female, age 91, both hemispheres 2.4
2775 Male, age 80, right hemisphere 2.1
2029 Male, age 61, right hemisphere 1.5
1979 Male, age 74, unknown 1.1
2195 Female, age 85, both hemispheres 1.0
Olfactory tubercle
nTPM: 1.7
1846 Male, age 80, right hemisphere 2.8
2487 Female, age 94, left hemisphere 1.6
2856 Male, age 75, right hemisphere 1.2
1998 Female, age 91, both hemispheres 1.0
Putamen
nTPM: 6.8
2647 Male, age 75, left hemisphere 14.9
2482 Female, age 94, left hemisphere 8.3
2489 Female, age 72, unknown 7.1
1829 Male, age 74, unknown 6.6
2466 Female, age 79, unknown 5.8
1937 Female, age 91, right hemisphere 2.5
1838 Male, age 80, right hemisphere 2.2
Septal nuclei
nTPM: 1.8
2199 Male, age 80, right hemisphere 3.8
2394 Male, age 61, left hemisphere 2.0
2031 Female, age 72, unknown 1.7
2629 Female, age 94, right hemisphere 1.7
2009 Female, age 91, both hemispheres 1.6
2059 Female, age 85, both hemispheres 1.4
1960 Male, age 74, unknown 0.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 13.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 11.0
Samples: 246

Max nTPM: 35.4
Min nTPM: 0.8
Std nTPM: 6.5
Median nTPM: 9.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 35.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 33.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 32.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 31.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 30.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 26.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 25.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 24.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 24.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 24.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 23.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 23.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 23.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 23.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 22.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 22.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 22.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 21.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 21.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 21.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 20.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 20.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 20.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 20.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 20.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 20.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 20.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 20.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 19.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 19.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 19.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 19.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 19.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 18.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 18.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 18.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 18.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 18.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 17.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 17.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 17.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 17.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 17.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 17.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 17.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 16.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 16.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 16.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 16.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 15.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 15.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 15.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 15.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 15.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 15.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 15.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 15.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 14.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 14.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 14.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 14.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 14.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 14.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 14.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 14.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 14.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 14.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 14.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 13.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 13.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 13.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 13.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 13.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 13.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 13.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 12.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 12.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 12.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 12.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 12.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 12.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 12.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 12.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 12.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 12.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 12.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 12.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 11.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 11.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 11.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 11.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 11.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 11.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 11.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 11.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 11.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 11.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 11.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 11.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 11.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 11.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 11.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 10.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 10.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 10.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 10.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 10.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 10.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 10.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 10.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 10.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 10.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 10.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 10.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 10.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 10.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 10.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 10.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 9.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 9.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 9.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 9.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 9.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 9.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 9.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 9.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 9.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 9.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 9.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 9.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 8.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 8.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 8.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 8.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 8.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 8.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 8.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 8.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 8.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 8.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 8.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 8.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 8.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 8.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 8.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 7.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 7.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 7.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 7.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 7.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 7.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 7.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 7.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 7.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 7.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 7.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 7.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 7.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 7.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 7.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 7.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 7.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 7.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 7.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 7.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 7.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 7.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 7.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 7.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 7.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 7.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 6.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 6.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 6.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 6.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 6.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 6.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 6.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 6.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 6.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 6.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 6.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 6.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 6.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 6.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 6.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 6.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 6.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 5.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 5.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 5.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 5.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 5.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 5.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 5.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 5.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 5.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 5.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 5.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 5.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 5.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 5.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 5.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 5.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 5.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 5.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 5.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 5.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 5.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 4.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 4.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 4.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 4.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 4.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 4.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 4.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 4.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 4.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 4.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 4.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 4.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 3.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 3.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 3.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 3.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 3.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 3.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 3.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 3.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 3.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 3.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 3.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 3.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 3.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 2.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 2.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 2.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 2.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 2.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 2.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 2.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 1.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 1.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 1.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 0.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 2.1
Samples: 246

Max nTPM: 26.7
Min nTPM: 0.0
Std nTPM: 2.8
Median nTPM: 1.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 26.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 18.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 15.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 14.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 9.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 7.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 7.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 7.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 7.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 6.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 6.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 6.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 6.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 6.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 5.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 5.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 5.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 5.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 5.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 5.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 5.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 5.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 4.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 4.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 4.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 4.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 4.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 4.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 4.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 4.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 4.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 4.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 4.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 4.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 4.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 3.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 3.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 3.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 3.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 3.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 3.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 3.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 3.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 3.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 3.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 3.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 3.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 3.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 3.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 3.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 3.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 3.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 3.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 2.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 2.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 2.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 2.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 2.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 2.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 2.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 2.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 2.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 2.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 2.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 2.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 2.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 2.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 2.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 2.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 2.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 2.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 2.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 2.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 2.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 2.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 2.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 2.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 2.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 2.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 1.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 1.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 1.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 1.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 1.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 1.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 1.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 1.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 1.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 1.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 1.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 1.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 1.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 1.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 1.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 1.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 1.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 1.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 1.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 1.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 1.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 1.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 1.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 1.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 1.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 1.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 1.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 1.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 1.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 1.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 1.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 1.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 1.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 1.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 1.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 1.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 1.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 1.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 1.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 1.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 1.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 1.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 1.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 1.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 1.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 1.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 1.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 1.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 1.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 1.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 1.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 1.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 1.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 1.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 1.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 1.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 1.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 1.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 1.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 1.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 1.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 1.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 1.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 0.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 0.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 0.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 0.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 0.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 0.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 0.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 0.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 0.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 0.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 0.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 0.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 0.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 0.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 0.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 0.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 0.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 0.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 0.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 0.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 0.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 0.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 0.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 0.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 0.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 0.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 0.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 0.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 0.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 0.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 0.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 0.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 0.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 0.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 0.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 0.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 0.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 0.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 0.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 0.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 0.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 0.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 0.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 0.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 0.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 0.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 0.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 0.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 0.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 0.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 0.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 0.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 0.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 0.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 0.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 0.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 0.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 0.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 0.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 0.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 0.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 0.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 0.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 0.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 0.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 0.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 0.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 0.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 0.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 0.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 0.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 0.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 0.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 0.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 0.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 0.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 0.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 0.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 0.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 0.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 0.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 0.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 0.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 0.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 0.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 0.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 0.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 0.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 0.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 0.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 0.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 0.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 0.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 0.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 0.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 0.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 0.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 0.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 0.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 0.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 0.0
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Brain - Putamen (basal ganglia)
Average nTPM: 13.6
Samples: 205

Max nTPM: 45.9
Min nTPM: 1.3
Std nTPM: 8.5
Median nTPM: 12.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 45.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 44.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 38.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 37.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 36.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 35.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 34.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 33.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 31.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 30.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 30.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 30.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 29.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 29.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 29.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 27.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 27.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 26.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 26.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 26.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 25.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 24.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 24.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 24.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 24.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 23.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 23.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 23.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 22.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 21.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 21.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 21.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 21.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 21.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 20.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 20.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 20.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 20.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 20.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 19.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 19.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 19.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 18.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 18.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 18.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 18.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 18.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 18.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 18.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 18.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 17.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 17.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 17.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 17.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 17.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 16.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 16.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 16.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 16.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 16.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 16.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 16.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 16.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 16.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 16.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 16.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 16.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 15.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 15.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 15.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 15.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 14.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 14.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 14.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 14.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 14.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 14.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 14.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 14.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 14.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 14.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 14.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 14.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 14.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 14.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 13.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 13.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 13.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 13.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 13.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 13.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 13.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 13.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 12.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 12.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 12.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 12.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 12.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 12.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 12.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 12.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 12.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 12.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 12.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 12.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 12.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 12.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 11.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 11.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 11.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 11.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 11.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 11.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 10.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 10.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 10.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 10.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 10.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 10.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 10.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 10.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 10.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 9.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 9.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 9.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 9.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 9.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 9.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 9.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 9.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 9.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 9.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 9.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 9.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 8.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 8.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 8.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 8.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 8.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 8.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 8.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 8.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 8.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 8.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 7.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 7.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 7.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 7.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 7.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 7.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 7.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 7.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 7.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 7.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 7.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 7.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 7.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 7.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 7.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 7.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 6.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 6.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 6.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 6.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 6.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 6.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 5.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 5.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 5.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 5.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 5.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 5.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 5.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 5.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 5.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 5.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 5.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 5.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 4.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 4.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 4.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 4.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 4.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 4.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 4.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 3.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 3.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 3.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 3.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 3.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 3.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 3.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 3.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 3.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 3.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 3.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 3.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 2.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 2.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 2.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 2.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 2.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 2.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 1.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 4.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1.5
FF:10164-103B2 76 years, female 1.5
Globus pallidus
Scaled Tags Per Million: 4.1
FF:10161-103A8 76 years, female 5.2
FF:10175-103C4 60 years, female 3.1
Nucleus accumbens
Scaled Tags Per Million: 4.7
FF:10037-101F1 23-56 years, mixed 4.7
Putamen
Scaled Tags Per Million: 0.6
FF:10176-103C5 60 years, female 0.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 0.6
Pig sample Sample description nTPM
Caudate
nTPM: 0.4
Samples: 4

Max nTPM: 0.6
Min nTPM: 0.2
Sample A Female 0.2
Sample B Female 0.4
Sample C Male 0.6
Sample D Male 0.4
Putamen
nTPM: 0.6
Samples: 4

Max nTPM: 1.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.9
Sample C Male 0.4
Sample D Male 1.0
Septum
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.1
Sample C Male 0.1
Sample D Male 0.0
Ventral pallidum
nTPM: 0.2
Samples: 4

Max nTPM: 0.4
Min nTPM: 0.1
Sample A Female 0.1
Sample B Female 0.4
Sample C Male 0.1
Sample D Male 0.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 0.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0
Septum
nTPM: 0.2
Samples: 4

Max nTPM: 0.3
Min nTPM: 0.1
Sample A Male 0.2
Sample B Male 0.3
Sample C Female 0.1
Sample D Female 0.1
Ventral forebrain
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.4
68341340 Antisense, RP_041207_01_D05, Mouse strain C57BL/6J (56 days, male) 0.4
Pallidum
Expression energy: 0.5
68341340 Antisense, RP_041207_01_D05, Mouse strain C57BL/6J (56 days, male) 0.5

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