HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:19.2 nTPM
HPA:19.2 nTPM
GTEx:18.2 nTPM
FANTOM5:33.0 Scaled Tags Per Million
Pig:83.5 nTPM
Mouse:63.6 nTPM
Allen mouse:11.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038814
Glial cells Not detected
Neuronal cells Not detected

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.2
Sample id Sample description nTPM
Hippocampus
nTPM: 10.6
2621 Female, age 67, right hemisphere 37.4
2148 Female, age 91, left hemisphere 16.3
1911 Female, age 85, right hemisphere 4.1
1898 Male, age 80, left hemisphere 3.7
1855 Male, age 76, left hemisphere 2.0
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 12.2
1927 Female, age 91, both hemispheres 23.8
2530 Female, age 94, left hemisphere 19.3
2531 Female, age 67, both hemispheres 15.9
2246 Female, age 85, both hemispheres 10.1
2010 Male, age 76, both hemispheres 3.3
2528 Male, age 74, both hemispheres 0.7
Entorhinal gyrus
nTPM: 10.0
2613 Female, age 94, left hemisphere 34.7
2686 Male, age 75, right hemisphere 7.9
1938 Female, age 85, left hemisphere 7.8
1787 Male, age 76, left hemisphere 4.8
2764 Male, age 80, right hemisphere 4.5
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 15.1
2749 Male, age 80, left hemisphere 45.3
1873 Female, age 85, both hemispheres 11.8
2082 Female, age 91, right hemisphere 6.9
2527 Male, age 74, both hemispheres 6.5
2045 Male, age 76, both hemispheres 5.2
Hippocampus, CA2
nTPM: 7.1
1892 Male, age 76, both hemispheres 15.0
1963 Male, age 80, left hemisphere 14.7
2437 Female, age 94, left hemisphere 8.3
2249 Male, age 74, both hemispheres 4.5
1940 Female, age 85, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
Hippocampus, CA3
nTPM: 19.2
2620 Female, age 94, left hemisphere 36.3
2137 Male, age 80, left hemisphere 34.2
2861 Female, age 67, both hemispheres 28.4
1867 Male, age 76, both hemispheres 9.7
2436 Male, age 74, both hemispheres 4.9
1891 Female, age 85, both hemispheres 1.7
Parahippocampal cortex
nTPM: 7.8
2245 Female, age 91, both hemispheres 18.0
2622 Female, age 67, right hemisphere 16.3
2693 Female, age 94, both hemispheres 9.3
2250 Female, age 67, right hemisphere 8.7
1990 Female, age 91, right hemisphere 7.4
2692 Male, age 74, both hemispheres 7.3
1850 Male, age 80, both hemispheres 5.5
1933 Female, age 85, both hemispheres 4.1
2532 Female, age 72, left hemisphere 1.6
2018 Male, age 76, both hemispheres 0.0
Perirhinal gyrus
nTPM: 8.0
1847 Female, age 91, left hemisphere 22.1
2521 Female, age 94, right hemisphere 7.5
1794 Male, age 80, right hemisphere 5.2
2848 Male, age 76, right hemisphere 3.3
1841 Female, age 85, right hemisphere 1.7
Subiculum
nTPM: 5.0
2438 Female, age 94, left hemisphere 12.0
1901 Male, age 80, both hemispheres 9.3
2619 Male, age 74, both hemispheres 4.7
1977 Female, age 85, both hemispheres 4.3
2042 Male, age 76, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.2
Samples: 197

Max nTPM: 53.7
Min nTPM: 0.7
Std nTPM: 12.1
Median nTPM: 17.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 53.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 51.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 50.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 50.1
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 43.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 42.7
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 42.4
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 42.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 41.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 41.0
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 39.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.0
FF:10169-103B7 60 years, female 40.8
FF:10153-102I9 76 years, female 25.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 83.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 60.4
Samples: 4

Max nTPM: 67.2
Min nTPM: 53.7
Sample A Female 67.2
Sample B Female 59.4
Sample C Male 61.4
Sample D Male 53.7
Entorhinal cortex
nTPM: 83.5
Samples: 4

Max nTPM: 102.6
Min nTPM: 71.7
Sample A Female 77.6
Sample B Female 82.2
Sample C Male 102.6
Sample D Male 71.7
Subiculum
nTPM: 69.9
Samples: 4

Max nTPM: 95.0
Min nTPM: 60.1
Sample A Female 95.0
Sample B Female 61.7
Sample C Male 62.6
Sample D Male 60.1
Ventral hippocampus
nTPM: 54.0
Samples: 4

Max nTPM: 74.3
Min nTPM: 36.5
Sample A Female 36.5
Sample B Female 44.3
Sample C Male 60.9
Sample D Male 74.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 63.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 63.7
Samples: 4

Max nTPM: 72.0
Min nTPM: 58.7
Sample A Male 62.0
Sample B Male 61.9
Sample C Female 58.7
Sample D Female 72.0
Hippocampal formation
nTPM: 60.7
Samples: 4

Max nTPM: 65.2
Min nTPM: 56.2
Sample A Male 58.2
Sample B Male 63.2
Sample C Female 65.2
Sample D Female 56.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.0
70231074 Antisense, RP_050526_01_B06, Mouse strain C57BL/6J (56 days, male) 11.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.