ARSD

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:16.4 FPKM
GTEx:5.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA004694

 

Endothelial cells

Medium  

Glandular cells

High  

Peripheral nerve/ganglion

Medium  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

16.4

overview Male, age 54
Sample 1
FPKM: 15.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 29.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 13.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 13.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 13.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 12.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 16.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

5.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 2.8
Samples: 149

Max RPKM: 7
Min RPKM: 0.8
Std RPKM: 0.8
Median RPKM: 2.7
GTEX-Y5LM-1426-SM-5RQJL 7.0
GTEX-13PL7-2426-SM-5J2N3 5.4
GTEX-Y9LG-1326-SM-4VBQB 5.3
GTEX-117YX-0526-SM-5EGJH 4.7
GTEX-XBED-1726-SM-47JYO 4.6
GTEX-X15G-1526-SM-4PQZM 4.6
GTEX-ZPIC-2626-SM-57WE2 4.3
GTEX-X4EO-2726-SM-4E3HS 4.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 9.1
Samples: 196

Max RPKM: 24.2
Min RPKM: 0.3
Std RPKM: 6.2
Median RPKM: 7.8
GTEX-Y5LM-1526-SM-4VDTA 24.2
GTEX-147F3-1926-SM-5SIB9 24.0
GTEX-U3ZN-2126-SM-4DXU1 23.9
GTEX-PWN1-1426-SM-48TDF 23.3
GTEX-QCQG-1626-SM-48U26 23.2
GTEX-13QBU-1826-SM-5IJG3 22.7
GTEX-1211K-1726-SM-5FQUJ 22.4
GTEX-W5WG-2426-SM-4LMI6 22.1
Show all