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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
47.0
nTPM
HPA Brain:
128.4
nTPM
GTEx:
47.0
nTPM
FANTOM5:
370.3
Scaled Tags Per Million
Pig:
111.7
nTPM
Mouse:
157.3
nTPM
Allen mouse:
17.8
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
128.4
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 123.5
2019
Male, age 18, unknown
134.2
2411
Female, age 72, unknown
132.2
1870
Female, age 42, unknown
130.4
2586
Male, age 75, left hemisphere
128.6
1827
Male, age 72, unknown
126.6
2828
Female, age 72, unknown
122.2
1830
Male, age 51, unknown
119.8
2666
Male, age 74, left hemisphere
118.1
1833
Male, age 53, unknown
116.5
2219
Male, age 76, both hemispheres
107.0
Dorsal raphe nucleus nTPM: 114.5
2750
Male, age 76, both hemispheres
124.3
2016
Female, age 72, unknown
117.6
1828
Male, age 53, unknown
116.1
2298
Female, age 72, unknown
108.9
2047
Male, age 72, unknown
105.6
Inferior colliculus nTPM: 112.2
1890
Male, age 53, unknown
117.2
2097
Female, age 72, unknown
115.0
1848
Female, age 42, unknown
111.2
2849
Male, age 72, unknown
105.6
Median raphe nucleus nTPM: 112.3
2220
Male, age 76, midline
112.3
Periaquaductal grey, anterior nTPM: 120.4
2502
Female, age 75, unknown
131.5
1947
Male, age 18, unknown
119.7
1795
Male, age 51, unknown
110.2
Periaquaductal grey, dorsal nTPM: 109.9
1831
Male, age 72, unknown
117.9
2464
Female, age 72, unknown
115.1
2850
Male, age 76, both hemispheres
107.7
1840
Male, age 53, unknown
98.8
Periaquaductal grey, lateral nTPM: 106.4
2053
Male, age 18, unknown
115.4
2140
Male, age 76, both hemispheres
102.9
2272
Male, age 74, both hemispheres
100.9
Pretectal area nTPM: 124.7
1816
Male, age 51, unknown
142.6
1815
Male, age 53, unknown
136.2
2007
Male, age 72, unknown
135.2
1944
Female, age 72, unknown
133.5
1817
Female, age 42, unknown
129.3
2273
Male, age 74, both hemispheres
128.9
2407
Male, age 75, both hemispheres
115.2
2316
Male, age 76, right hemisphere
114.9
2825
Male, age 18, unknown
113.1
2667
Female, age 75, unknown
111.9
2224
Female, age 72, unknown
110.2
Red nucleus nTPM: 128.4
1865
Male, age 51, unknown
148.2
1821
Female, age 72, unknown
145.1
1904
Male, age 53, unknown
139.4
2503
Female, age 72, unknown
136.9
2785
Male, age 18, unknown
136.2
1954
Female, age 42, unknown
126.5
2588
Male, age 74, left hemisphere
126.0
2769
Male, age 72, unknown
123.6
2227
Male, age 72, unknown
122.9
2823
Male, age 76, right hemisphere
117.2
2725
Female, age 75, unknown
112.0
2584
Male, age 75, left hemisphere
106.3
Substantia nigra nTPM: 114.9
1889
Female, age 72, unknown
129.7
2409
Female, age 72, unknown
126.5
2583
Male, age 75, right hemisphere
119.8
2590
Female, age 75, unknown
118.7
1941
Male, age 53, unknown
117.3
2241
Male, age 72, unknown
112.7
1851
Male, age 51, unknown
112.4
2665
Male, age 74, both hemispheres
108.1
1916
Female, age 42, unknown
103.6
2699
Male, age 18, unknown
100.7
Superior colliculus nTPM: 127.4
1913
Female, age 42, unknown
146.7
2668
Female, age 75, unknown
141.8
1995
Male, age 72, unknown
132.7
2587
Male, age 74, left hemisphere
129.9
2261
Male, age 18, unknown
126.2
2664
Male, age 75, both hemispheres
125.8
2087
Female, age 72, unknown
121.2
1895
Male, age 76, right hemisphere
120.1
1796
Male, age 53, unknown
119.2
1839
Male, age 51, unknown
110.9
Ventral tegmental area nTPM: 110.2
2410
Female, age 72, unknown
119.0
2223
Female, age 72, unknown
117.9
1942
Male, age 51, unknown
108.2
2218
Male, age 76, both hemispheres
106.6
2021
Male, age 53, unknown
105.9
1915
Female, age 42, unknown
103.4
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
47.0
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 47.0
Samples: 139
Max nTPM: 110.9
Min nTPM: 17.0
Std nTPM: 16.8
Median nTPM: 44.1
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
110.9
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
99.2
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
91.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
89.9
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
88.9
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
81.5
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
79.6
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
77.6
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
76.2
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
75.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
74.1
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
72.9
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
70.2
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
69.7
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
69.3
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
68.9
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
68.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
66.1
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
65.6
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
64.7
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
64.2
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
64.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
63.9
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
63.0
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
60.8
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
60.2
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
59.9
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
59.7
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
59.7
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
59.5
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
59.3
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
58.7
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
58.2
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
57.6
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
57.2
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
56.0
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
54.5
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
53.8
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
53.8
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
53.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
53.2
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
52.9
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
52.6
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
52.3
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
51.5
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
50.9
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
50.7
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
49.3
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
49.0
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
47.8
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
47.6
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
47.3
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
47.2
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
47.1
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
47.0
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
46.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
46.3
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
45.9
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
45.8
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
45.8
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
45.8
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
45.7
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
45.7
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
45.3
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
45.2
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
45.2
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
45.2
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
45.1
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
44.4
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
44.1
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
43.8
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
43.3
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
43.1
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
43.1
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
43.1
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
42.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
42.4
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
42.4
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
42.3
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
42.2
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
42.0
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
41.7
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
41.2
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
41.1
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
40.2
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
40.1
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
39.8
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
39.8
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
39.5
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
39.3
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
39.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
39.2
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
38.9
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
38.7
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
38.6
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
38.1
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
37.6
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
37.4
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
37.2
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
36.2
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
36.1
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
36.0
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
34.9
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
34.7
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
34.7
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
34.3
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
33.3
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
33.3
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
33.3
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
32.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
32.5
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
32.0
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
31.9
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
31.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
31.0
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
30.9
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
30.8
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
30.8
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
30.5
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
30.2
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
30.2
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
30.1
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
29.4
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
29.3
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
28.9
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
28.8
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
28.6
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
28.6
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
27.5
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
27.3
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
26.2
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
25.9
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
25.1
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
24.6
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
23.3
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
23.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
19.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
19.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
17.0
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
157.3
Mouse sample
Sample description
nTPM
Midbrain nTPM: 157.3
Samples: 4
Max nTPM: 162.9
Min nTPM: 143.8
Sample A
Male
143.8
Sample B
Male
162.7
Sample C
Female
162.9
Sample D
Female
159.8
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.