COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: High
Glandular cells: Medium
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:27.5 nTPM
HPA:16.4 nTPM
GTEx:27.5 nTPM
FANTOM5:36.4 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA050007Antibody HPA076784Antibody CAB033767
Endothelial cells HighHighLow
Glandular cells MediumHighLow
Peripheral nerve/ganglion Not detectedHighMedium






COLON - HPA RNA-seqi
Average nTPM 16.4
overview
Male, age 54 		Colon sample 67
nTPM: 17.3
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 13.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 16.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 15.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 12.3
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 17.1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 16.3
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 16.3
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 16.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 21.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 17.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 16.6
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 16.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 27.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 27.5
Samples: 373

Max nTPM: 69.1
Min nTPM: 11.9
Std nTPM: 10.1
Median nTPM: 25.2
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 69.1
GTEX-1F5PL-1926-SM-7MXTP 40-49 years, female 59.5
GTEX-18D9A-1326-SM-7LT8P 30-39 years, female 59.4
GTEX-1MGNQ-2126-SM-EV7AC 40-49 years, male 57.3
GTEX-14E1K-1626-SM-664MO 50-59 years, male 57.1
GTEX-16MTA-1626-SM-6M47N 50-59 years, male 56.6
GTEX-1B8KE-1526-SM-7DUG2 50-59 years, male 51.8
GTEX-15G1A-1926-SM-7KUFF 30-39 years, male 51.8
GTEX-1LSNM-1426-SM-E6CIH 50-59 years, male 50.4
GTEX-1J8Q3-2426-SM-CL53S 60-69 years, male 50.3
GTEX-1A32A-2626-SM-73KX9 50-59 years, female 49.5
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Colon - Transverse
Average nTPM: 19.3
Samples: 406

Max nTPM: 59.7
Min nTPM: 10.4
Std nTPM: 7.0
Median nTPM: 17.0
GTEX-15G1A-1826-SM-7KUKO 30-39 years, male 59.7
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 58.9
GTEX-WY7C-1626-SM-4ONC8 50-59 years, male 49.1
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 43.4
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 43.3
GTEX-1JN1M-2626-SM-CY8I3 60-69 years, female 41.1
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 40.3
GTEX-18QFQ-1526-SM-72D57 30-39 years, male 40.0
GTEX-ZF29-1726-SM-4WKFV 60-69 years, female 39.5
GTEX-1MUQO-2626-SM-EWRO3 60-69 years, male 39.1
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 36.7
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 36.4
FF:10014-101C5 62,83,84 years, mixed 36.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.