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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:101.0 nTPM
HPA:101.0 nTPM
GTEx:236.9 nTPM
FANTOM5:335.5 Scaled Tags Per Million
Pig:1.7 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 101.0
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 90.1
2816 Male, age 47, midline 99.4
1981 Female, age 72, midline 93.6
2048 Male, age 55, midline 93.4
2194 Female, age 79, both hemispheres 92.5
2565 Male, age 75, midline 71.6
Cervical spinal cord, dorsal horn
nTPM: 97.8
2296 Male, age 66, both hemispheres 186.1
2173 Female, age 72, unknown 125.7
2069 Male, age 47, both hemispheres 85.4
1877 Male, age 55, unknown 82.6
2721 Male, age 90, both hemispheres 59.7
2297 Male, age 75, both hemispheres 47.5
Cervical spinal cord, ventral horn
nTPM: 101.0
2068 Male, age 55, unknown 123.8
2820 Female, age 79, both hemispheres 119.8
2098 Female, age 72, unknown 95.9
2480 Male, age 75, both hemispheres 91.9
2295 Male, age 66, both hemispheres 91.3
2809 Male, age 90, both hemispheres 83.5

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 236.9
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 236.9
Samples: 159

Max nTPM: 655.0
Min nTPM: 23.9
Std nTPM: 111.6
Median nTPM: 220.9
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 655.0
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 549.7
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 509.0
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 499.2
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 488.1
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 477.3
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 442.0
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 438.4
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 425.9
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 420.2
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 410.2
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 401.7
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 389.7
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 387.1
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 385.1
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 383.9
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 380.0
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 367.1
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 362.8
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 356.4
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 351.9
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 351.0
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 347.9
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 345.1
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 344.5
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 342.9
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 339.1
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 334.4
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 334.2
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 331.5
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 330.0
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 327.1
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 323.2
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 319.1
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 316.7
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 315.9
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 313.7
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 313.5
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 313.4
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 313.3
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 312.0
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 311.1
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 309.3
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 308.6
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 308.3
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 306.3
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 303.9
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 296.9
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 292.2
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 290.3
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 290.3
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 289.9
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 285.0
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 284.4
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 281.1
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 280.0
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 279.6
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 276.9
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 273.3
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 272.0
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 268.1
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 267.1
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 264.4
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 264.2
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 261.9
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 261.8
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 260.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 260.3
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 244.8
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 239.0
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 238.6
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 238.6
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 238.1
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 237.9
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 237.4
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 236.5
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 230.9
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 227.9
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 226.7
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 220.9
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 217.7
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 217.1
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 212.7
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 210.2
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 206.2
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 205.5
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 205.2
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 204.3
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 204.0
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 203.5
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 199.3
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 198.0
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 197.8
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 197.5
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 197.4
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 197.0
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 196.6
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 195.5
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 194.6
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 194.0
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 191.6
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 191.4
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 190.4
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 189.0
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 185.5
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 180.0
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 176.3
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 174.2
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 174.0
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 172.7
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 171.9
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 167.0
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 166.0
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 165.3
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 164.6
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 161.8
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 156.6
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 149.3
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 149.0
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 147.8
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 147.2
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 144.1
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 142.2
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 138.7
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 136.0
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 135.0
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 133.8
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 132.8
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 131.4
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 130.5
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 129.6
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 120.0
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 119.6
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 114.7
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 113.2
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 113.0
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 112.9
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 111.7
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 111.2
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 109.4
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 107.5
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 106.3
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 103.1
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 99.6
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 99.5
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 98.8
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 93.9
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 90.2
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 89.4
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 87.9
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 85.3
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 82.5
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 73.6
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 71.6
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 71.6
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 61.2
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 57.6
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 50.6
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 23.9
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 335.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 335.5
FF:10159-103A6 76 years, female 456.8
FF:10181-103D1 60 years, female 214.2

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1.7
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 1.3
Samples: 4

Max nTPM: 1.9
Min nTPM: 0.8
Sample A Female 1.5
Sample B Female 1.1
Sample C Male 0.8
Sample D Male 1.9
Ventral spinal cord
nTPM: 1.7
Samples: 4

Max nTPM: 2.1
Min nTPM: 1.4
Sample A Female 1.5
Sample B Female 1.8
Sample C Male 1.4
Sample D Male 2.1

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