COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:53.6 nTPM
HPA:20.3 nTPM
GTEx:53.6 nTPM
FANTOM5:57.5 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA030651
Endothelial cells Medium
Glandular cells Medium


COLON - HPA RNA-seqi
Average nTPM 20.3
overview
Male, age 54 		Colon sample 67
nTPM: 41.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 19.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 20.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 34
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 24.3
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 10.6
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 8.3
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 14.8
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 12.8
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 12.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 17.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 13.8
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 33.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 53.6
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 53.6
Samples: 373

Max nTPM: 379.3
Min nTPM: 10.7
Std nTPM: 35.2
Median nTPM: 44.0
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 379.3
GTEX-17HG3-1126-SM-7DUFC 30-39 years, female 191.6
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 169.4
GTEX-1RQEC-2626-SM-EVR3Z 60-69 years, male 164.8
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 162.6
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 157.7
GTEX-1LSNL-1626-SM-E9TJY 50-59 years, male 147.7
GTEX-1PIIG-2126-SM-EXUSD 30-39 years, male 142.2
GTEX-1HCU7-2726-SM-A9G3D 50-59 years, male 134.3
GTEX-1HCU6-2926-SM-B2LWV 60-69 years, female 133.3
GTEX-1P4AB-2626-SM-DTXEU 50-59 years, male 128.4
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Colon - Transverse
Average nTPM: 39.8
Samples: 406

Max nTPM: 137.2
Min nTPM: 10.9
Std nTPM: 19.3
Median nTPM: 34.9
GTEX-WVJS-2426-SM-EZ6LI 50-59 years, male 137.2
GTEX-1IGQW-2326-SM-CE6RV 60-69 years, male 130.4
GTEX-14C5O-2526-SM-73KU2 60-69 years, male 124.9
GTEX-1EMGI-2726-SM-7P8S4 60-69 years, male 120.8
GTEX-15SHU-2526-SM-6M47D 40-49 years, female 116.1
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 113.5
GTEX-1POEN-2026-SM-E6CRL 30-39 years, female 104.0
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 100.0
GTEX-14DAQ-2726-SM-5S2QY 60-69 years, female 96.8
GTEX-14JIY-3326-SM-6871E 60-69 years, male 94.2
GTEX-SJXC-2226-SM-EVYAK 60-69 years, male 93.3
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 57.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 57.5
FF:10014-101C5 62,83,84 years, mixed 57.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.