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SEMA3B

COLON - Expression summary

RNA expressioni
HPA:21.4TPM
GTEx:24.6RPKM
FANTOM5:51.3Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seqi

Average TPM

21.4
overview Male, age 54 Sample 1
TPM: 49.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 21.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 19.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 38.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 21.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 11.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 8.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 13.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 13.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 12.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 20.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 17.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 30.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi

Average RPKM

24.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 28.2
Samples: 149

Max RPKM: 103.8
Min RPKM: 7.8
Std RPKM: 17.7
Median RPKM: 24.4
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 103.8
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 95.2
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 88.6
GTEX-ZVT3-2826-SM-5GU6A 60-69 years, female 72.9
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 71.6
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 68.7
GTEX-X4EO-2726-SM-4E3HS 60-69 years, female 67.3
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 65.1
GTEX-145LS-2926-SM-5O99G 60-69 years, female 63.1
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 54.8
Show all
Colon - Transverse
RPKM: 21.8
Samples: 196

Max RPKM: 86.9
Min RPKM: 7.2
Std RPKM: 9.1
Median RPKM: 20.2
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 86.9
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 54.2
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 52.3
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 48.2
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 47.2
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 45.8
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 44.4
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 39.0
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 37.7
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 37.3
Show all

COLON - FANTOM5 CAGEi

Average Tags Per Million

51.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 51.3
FF:10014-101C5 62,83,84 years, mixed 51.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.