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MDH1
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TISSUE PRIMARY DATA WHITE MATTER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
WHITE MATTER - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:237.7 nTPM
HPA:237.7 nTPM
FANTOM5:135.3 Scaled Tags Per Million
Pig:98.8 nTPM
Mouse:707.0 nTPM

WHITE MATTER - HPA Brain RNA-seq
Max nTPM 237.7
Sample id Sample description nTPM
Angular gyrus (white matter)
nTPM: 197.8
1920 Male, age 76, both hemispheres 197.8
Anterior funiculus (white matter)
nTPM: 210.0
2819 Male, age 47, both hemispheres 253.1
2193 Male, age 75, both hemispheres 236.3
2734 Male, age 80, both hemispheres 184.1
2818 Female, age 79, both hemispheres 166.5
Area striata (white matter)
nTPM: 199.5
2258 Female, age 91, left hemisphere 199.5
Cerebellar white matter
nTPM: 178.0
2105 Male, age 74, right hemisphere 245.1
2773 Female, age 85, right hemisphere 186.0
1931 Female, age 91, left hemisphere 173.6
2174 Male, age 61, right hemisphere 164.5
1864 Male, age 80, left hemisphere 150.5
1837 Male, age 76, left hemisphere 148.3
Corpus callosum, genu (white matter)
nTPM: 182.0
1885 Female, age 94, left hemisphere 220.8
2771 Male, age 75, left hemisphere 207.8
1886 Female, age 67, right hemisphere 191.1
1934 Male, age 61, right hemisphere 162.0
1849 Female, age 91, right hemisphere 161.3
1887 Male, age 76, left hemisphere 148.8
Corpus callosum, splenium (white matter)
nTPM: 184.5
2104 Male, age 75, left hemisphere 202.9
2238 Female, age 94, right hemisphere 196.5
2847 Female, age 67, right hemisphere 193.9
1946 Male, age 76, left hemisphere 144.7
Dorsal funiculus (white matter)
nTPM: 191.3
2128 Male, age 75, both hemispheres 227.7
2812 Male, age 66, both hemispheres 205.7
2810 Male, age 90, both hemispheres 202.7
2817 Male, age 47, both hemispheres 167.2
2064 Female, age 79, both hemispheres 153.4
Lateral funiculus (white matter)
nTPM: 206.1
2099 Male, age 90, both hemispheres 228.2
2192 Male, age 75, both hemispheres 215.6
2294 Male, age 66, both hemispheres 208.3
2094 Female, age 79, both hemispheres 172.4
Occipital cortex (white matter)
nTPM: 224.8
2259 Male, age 75, midline 232.6
2257 Female, age 67, both hemispheres 217.0
Parahippocampal cortex (white matter)
nTPM: 219.8
2157 Female, age 91, both hemispheres 219.8
Parieto-temporal junction (white matter)
nTPM: 179.9
1935 Female, age 94, right hemisphere 249.1
1999 Female, age 67, right hemisphere 186.4
2469 Male, age 75, right hemisphere 181.9
2774 Male, age 61, right hemisphere 159.8
2770 Female, age 91, right hemisphere 158.8
2121 Male, age 76, left hemisphere 143.5
Somatomor cortex, precentral gyrus (white matter)
nTPM: 231.8
2439 Male, age 75, right hemisphere 231.8
Somatosensory cortex, postcentral gyrus, ventral (white matter)
nTPM: 237.7
2623 Male, age 75, right hemisphere 237.7
Temporal white matter
nTPM: 165.2
2523 Female, age 94, left hemisphere 190.4
2254 Male, age 75, right hemisphere 189.2
2736 Female, age 91, right hemisphere 177.5
1801 Male, age 76, left hemisphere 138.8
2524 Female, age 85, left hemisphere 130.2

WHITE MATTER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 135.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Corpus callosum
Scaled Tags Per Million: 135.3
FF:10042-101F6 24-68 years, mixed 135.3

WHITE MATTER - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 98.8
Pig sample Sample description nTPM
Corpus callosum
nTPM: 98.8
Samples: 4

Max nTPM: 101.1
Min nTPM: 97.0
Sample A Female 98.0
Sample B Female 101.1
Sample C Male 98.9
Sample D Male 97.0

WHITE MATTER - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 707.0
Mouse sample Sample description nTPM
Corpus callosum
nTPM: 707.0
Samples: 3

Max nTPM: 729.1
Min nTPM: 666.4
Sample A Male 725.4
Sample B Male 729.1
Sample D Female 666.4

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by the Knut & Alice Wallenberg Foundation.