TTC27

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:6.8 FPKM
GTEx:4.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA031246

 

Antibody HPA055596

 

Endothelial cells

High   Low  

Glandular cells

High   Medium  

Peripheral nerve/ganglion

Medium   Low  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

6.8

overview Male, age 54
Sample 1
FPKM: 4.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 6.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 4.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 4.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 6.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 7.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 13.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

4.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 4.2
Samples: 149

Max RPKM: 8
Min RPKM: 1.6
Std RPKM: 0.8
Median RPKM: 4.2
GTEX-11TT1-0926-SM-5GU5M 8.0
GTEX-11P81-1426-SM-5P9JN 5.9
GTEX-11DXX-1926-SM-5EGJK 5.9
GTEX-146FH-2426-SM-5Q5EW 5.8
GTEX-ZTTD-2626-SM-57WEX 5.8
GTEX-14E6E-1726-SM-5S2R6 5.7
GTEX-13VXT-2026-SM-5L3EW 5.7
GTEX-145ME-1126-SM-5SIAT 5.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 4.1
Samples: 196

Max RPKM: 8.2
Min RPKM: 0.9
Std RPKM: 0.9
Median RPKM: 4.1
GTEX-11TT1-1026-SM-5PNW7 8.2
GTEX-13W3W-2126-SM-5K7UX 7.1
GTEX-11P81-1126-SM-5GU5G 6.4
GTEX-14AS3-1126-SM-5Q5CR 6.0
GTEX-O5YT-1426-SM-3MJHC 5.8
GTEX-QDVN-1326-SM-48TZ3 5.8
GTEX-144GM-1226-SM-5LU52 5.8
GTEX-XMK1-1726-SM-4B64Z 5.7
Show all