COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:23.8 nTPM
HPA:9.9 nTPM
GTEx:23.8 nTPM
FANTOM5:31.2 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA037959Antibody HPA038448
Endothelial cells LowMedium
Glandular cells HighLow
Peripheral nerve/ganglion Medium-



COLON - HPA RNA-seqi
Average nTPM 9.9
overview
Male, age 54 		Colon sample 67
nTPM: 11.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 13.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 7.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 11.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 12.4
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 9
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 5.1
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 5.9
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 8.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 7
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 11.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 11.6
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 13.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 23.8
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 23.8
Samples: 373

Max nTPM: 66.5
Min nTPM: 4.8
Std nTPM: 8.6
Median nTPM: 22.3
GTEX-1HCU6-2926-SM-B2LWV 60-69 years, female 66.5
GTEX-15RJE-2226-SM-6M46A 40-49 years, male 53.8
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 48.0
GTEX-1JMQK-2326-SM-ARZN4 60-69 years, male 45.5
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 45.1
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 45.0
GTEX-1A3MV-1026-SM-72D5U 30-39 years, male 44.8
GTEX-15F5U-1426-SM-7KUN2 40-49 years, male 43.7
GTEX-1A32A-2626-SM-73KX9 50-59 years, female 43.4
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 42.6
GTEX-1H3VE-2326-SM-9KNVU 40-49 years, male 42.6
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Colon - Transverse
Average nTPM: 18.6
Samples: 406

Max nTPM: 48.9
Min nTPM: 3.1
Std nTPM: 7.0
Median nTPM: 17.4
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 48.9
GTEX-1C6VQ-2726-SM-73KUL 50-59 years, male 44.6
GTEX-14ICK-1026-SM-6AJA4 40-49 years, male 40.0
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 39.0
GTEX-1IGQW-2326-SM-CE6RV 60-69 years, male 37.6
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 37.4
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 37.4
GTEX-1GZ4I-2426-SM-9WPPP 50-59 years, male 37.2
GTEX-15SHU-2526-SM-6M47D 40-49 years, female 37.0
GTEX-1HCU6-2726-SM-A9SKV 60-69 years, female 36.3
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 36.0
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 31.2
FF:10014-101C5 62,83,84 years, mixed 31.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.