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SERPINB1
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:10.9 nTPM
FANTOM5:31.1 Scaled Tags Per Million
Pig:9.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA018871Antibody HPA052642
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 10.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 10.9
Samples: 246

Max nTPM: 41.7
Min nTPM: 3.4
Std nTPM: 6.0
Median nTPM: 9.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 41.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 34.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 32.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 30.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 28.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 27.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 26.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 26.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 26.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 26.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 25.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 24.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 23.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 22.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 22.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 22.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 21.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 21.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 20.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 20.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 20.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 20.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 19.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 19.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 19.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 18.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 18.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 18.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 17.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 17.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 17.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 16.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 16.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 16.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 16.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 16.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 16.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 15.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 15.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 15.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 15.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 14.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 14.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 14.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 14.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 14.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 14.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 14.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 14.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 14.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 14.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 14.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 14.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 13.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 13.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 13.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 13.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 13.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 13.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 13.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 13.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 12.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 12.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 12.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 12.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 12.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 12.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 12.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 12.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 12.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 12.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 12.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 12.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 12.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 12.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 12.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 12.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 12.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 12.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 12.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 12.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 11.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 11.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 11.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 11.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 11.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 11.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 11.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 11.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 11.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 11.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 11.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 11.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 11.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 11.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 11.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 10.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 10.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 10.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 10.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 10.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 10.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 10.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 10.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 10.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 10.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 10.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 10.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 10.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 9.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 9.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 9.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 9.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 9.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 9.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 9.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 9.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 9.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 9.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 9.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 9.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 9.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 9.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 9.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 9.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 9.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 9.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 9.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 9.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 9.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 8.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 8.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 8.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 8.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 8.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 8.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 8.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 8.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 8.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 8.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 8.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 8.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 8.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 8.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 8.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 8.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 8.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 8.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 8.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 8.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 8.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 8.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 8.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 8.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 8.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 8.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 7.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 7.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 7.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 7.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 7.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 7.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 7.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 7.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 7.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 7.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 7.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 7.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 7.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 7.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 7.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 7.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 7.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 7.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 7.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 7.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 7.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 7.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 7.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 6.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 6.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 6.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 6.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 6.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 6.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 6.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 6.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 6.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 6.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 6.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 6.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 6.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 6.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 6.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 6.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 6.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 6.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 6.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 5.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 5.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 5.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 5.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 5.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 5.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 5.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 5.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 5.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 5.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 5.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 5.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 5.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 5.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 5.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 5.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 5.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 5.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 5.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 5.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 5.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 4.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 4.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 4.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 4.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 4.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 4.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 4.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 4.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 4.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 4.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 4.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 4.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 4.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 4.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 4.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 4.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 4.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 4.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 4.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 4.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 4.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 4.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 4.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 4.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 3.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 3.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 3.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 31.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 31.1
FF:10164-103B2 76 years, female 31.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 9.2
Pig sample Sample description nTPM
Caudate
nTPM: 9.3
Samples: 4

Max nTPM: 10.3
Min nTPM: 7.8
Sample A Female 10.2
Sample B Female 10.3
Sample C Male 8.7
Sample D Male 7.8

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