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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
121.0
nTPM
Monaco:
267.5
nTPM
Schmiedel:
319.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
121.0
HPA sample
nTPM
gdT-cell nTPM: 92.3
Samples: 6
Max nTPM: 106.3
Min nTPM: 75.3
P10809_1007
75.3
P10809_1022
106.3
P10809_1041
103.8
P10809_1060
88.9
P10809_1077
75.3
P10809_1098
104.2
MAIT T-cell nTPM: 92.4
Samples: 6
Max nTPM: 110.8
Min nTPM: 78.6
P10809_1006
83.0
P10809_1024
101.7
P10809_1043
78.6
P10809_1062
94.8
P10809_1083
85.7
P10809_1097
110.8
Memory CD4 T-cell nTPM: 97.6
Samples: 6
Max nTPM: 107.5
Min nTPM: 84.2
P10809_1014
88.3
P10809_1026
84.2
P10809_1045
107.5
P10809_1064
95.8
P10809_1086
107.2
P10809_1113
102.8
Memory CD8 T-cell nTPM: 94.4
Samples: 5
Max nTPM: 113.8
Min nTPM: 81.0
P10809_1012
81.0
P10809_1027
82.1
P10809_1046
91.4
P10809_1065
103.8
P10809_1111
113.8
Naive CD4 T-cell nTPM: 95.1
Samples: 6
Max nTPM: 106.5
Min nTPM: 87.3
P10809_1015
88.5
P10809_1030
87.3
P10809_1049
105.3
P10809_1068
90.7
P10809_1085
106.5
P10809_1112
92.3
Naive CD8 T-cell nTPM: 93.8
Samples: 6
Max nTPM: 115.6
Min nTPM: 75.0
P10809_1016
75.0
P10809_1031
85.2
P10809_1050
95.4
P10809_1069
115.6
P10809_1087
98.4
P10809_1110
93.3
T-reg nTPM: 121.0
Samples: 6
Max nTPM: 148.1
Min nTPM: 105.4
P10809_1018
105.4
P10809_1037
109.7
P10809_1056
122.6
P10809_1075
124.4
P10809_1094
116.0
P10809_1106
148.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
267.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 208.9
Samples: 4
Max nTPM: 246.7
Min nTPM: 166.7
RHH5202_R3573
246.7
RHH5230_R3602
216.9
RHH5259_R3631
166.7
RHH5288_R3660
205.4
Effector memory CD8 T-cell nTPM: 267.6
Samples: 4
Max nTPM: 279.9
Min nTPM: 257.7
RHH5203_R3574
279.9
RHH5231_R3603
266.9
RHH5260_R3632
265.7
RHH5289_R3661
257.7
MAIT T-cell nTPM: 244.9
Samples: 4
Max nTPM: 265.7
Min nTPM: 216.0
RHH5233_R3605
252.2
RHH5205_R3576
265.7
RHH5262_R3634
245.7
RHH5297_R3663
216.0
Memory CD4 T-cell TFH nTPM: 200.9
Samples: 4
Max nTPM: 218.2
Min nTPM: 183.5
RHH5300_R3666
183.5
RHH5236_R3608
212.6
RHH5265_R3637
189.2
RHH5208_R3579
218.2
Memory CD4 T-cell Th1 nTPM: 204.7
Samples: 4
Max nTPM: 222.3
Min nTPM: 169.5
RHH5210_R3581
205.8
RHH5302_R3668
221.2
RHH5238_R3610
169.5
RHH5267_R3639
222.3
Memory CD4 T-cell Th1/Th17 nTPM: 221.5
Samples: 4
Max nTPM: 247.9
Min nTPM: 186.5
RHH5303_R3669
247.9
RHH5211_R3582
239.6
RHH5239_R3611
211.9
RHH5268_R3640
186.5
Memory CD4 T-cell Th17 nTPM: 242.1
Samples: 4
Max nTPM: 284.5
Min nTPM: 211.1
RHH5304_R3670
242.5
RHH5212_R3583
230.2
RHH5240_R3612
284.5
RHH5269_R3641
211.1
Memory CD4 T-cell Th2 nTPM: 227.3
Samples: 4
Max nTPM: 254.4
Min nTPM: 208.1
RHH5305_R3671
227.0
RHH5213_R3584
254.4
RHH5241_R3613
219.7
RHH5270_R3642
208.1
Naive CD4 T-cell nTPM: 207.3
Samples: 4
Max nTPM: 220.8
Min nTPM: 188.9
RHH5306_R3672
200.8
RHH5214_R3585
220.8
RHH5242_R3614
188.9
RHH5271_R3643
218.8
Naive CD8 T-cell nTPM: 196.2
Samples: 4
Max nTPM: 259.6
Min nTPM: 164.3
RHH5201_R3572
259.6
RHH5229_R3601
164.3
RHH5258_R3630
179.6
RHH5287_R3659
181.3
Non-Vd2 gdTCR nTPM: 258.4
Samples: 4
Max nTPM: 285.4
Min nTPM: 205.8
RHH5235_R3607
258.8
RHH5264_R3636
283.4
RHH5207_R3578
285.4
RHH5299_R3665
205.8
T-reg nTPM: 209.7
Samples: 4
Max nTPM: 232.7
Min nTPM: 187.9
RHH5301_R3667
207.1
RHH5237_R3609
232.7
RHH5266_R3638
210.9
RHH5209_R3580
187.9
Terminal effector memory CD4 T-cell nTPM: 243.9
Samples: 2
Max nTPM: 264.2
Min nTPM: 223.6
RHH5243_R3615
264.2
RHH5272_R3644
223.6
Terminal effector memory CD8 T-cell nTPM: 257.5
Samples: 4
Max nTPM: 295.7
Min nTPM: 212.0
RHH5232_R3604
254.9
RHH5204_R3575
212.0
RHH5261_R3633
295.7
RHH5296_R3662
267.3
Vd2 gdTCR nTPM: 253.3
Samples: 4
Max nTPM: 315.4
Min nTPM: 204.4
RHH5234_R3606
226.0
RHH5206_R3577
267.5
RHH5263_R3635
315.4
RHH5298_R3664
204.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.