ARAF

COLON - Expression summary

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RNA expression

HPA:24.4 FPKM
GTEx:19.3 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA066326

 

Endothelial cells

Medium  

Glandular cells

High  

Peripheral nerve/ganglion

Medium  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

24.4

overview Male, age 54
Sample 1
FPKM: 24.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 31.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 27.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 19.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 19.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 26.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 22.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

19.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 17.1
Samples: 149

Max RPKM: 22.3
Min RPKM: 9.2
Std RPKM: 2.6
Median RPKM: 17.3
GTEX-13PL7-2426-SM-5J2N3 22.3
GTEX-131XG-1526-SM-5GCNQ 22.1
GTEX-Y5LM-1426-SM-5RQJL 21.7
GTEX-11DXX-1926-SM-5EGJK 21.5
GTEX-111CU-1226-SM-5EGIN 21.3
GTEX-YEC3-2026-SM-4WWFL 21.1
GTEX-12WSL-1826-SM-5LZW9 21.0
GTEX-WQUQ-2626-SM-4MVNP 20.9
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 21.5
Samples: 196

Max RPKM: 33.9
Min RPKM: 6.2
Std RPKM: 3.8
Median RPKM: 21.8
GTEX-UJMC-1326-SM-4IHLS 33.9
GTEX-RM2N-0926-SM-48FD1 29.0
GTEX-UJHI-1126-SM-4IHLN 28.1
GTEX-XUJ4-2026-SM-4BOOW 27.9
GTEX-WFG7-1526-SM-4LVMG 27.7
GTEX-Q2AI-0926-SM-48U1F 27.4
GTEX-ZVT2-1926-SM-5GU5T 27.2
GTEX-YB5E-1626-SM-5IFIQ 27.2
Show all