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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
217.2
nTPM
Monaco:
385.5
nTPM
Schmiedel:
309.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
217.2
HPA sample
nTPM
gdT-cell nTPM: 107.2
Samples: 6
Max nTPM: 171.8
Min nTPM: 38.1
P10809_1007
64.2
P10809_1022
38.1
P10809_1041
107.5
P10809_1060
133.1
P10809_1077
128.7
P10809_1098
171.8
MAIT T-cell nTPM: 79.4
Samples: 6
Max nTPM: 117.2
Min nTPM: 42.0
P10809_1006
62.3
P10809_1024
42.0
P10809_1043
64.5
P10809_1062
79.8
P10809_1083
117.2
P10809_1097
110.8
Memory CD4 T-cell nTPM: 205.2
Samples: 6
Max nTPM: 281.5
Min nTPM: 117.0
P10809_1014
163.4
P10809_1026
117.0
P10809_1045
212.0
P10809_1064
211.6
P10809_1086
281.5
P10809_1113
245.6
Memory CD8 T-cell nTPM: 170.3
Samples: 5
Max nTPM: 326.7
Min nTPM: 84.6
P10809_1012
135.2
P10809_1027
84.6
P10809_1046
149.5
P10809_1065
155.7
P10809_1111
326.7
Naive CD4 T-cell nTPM: 217.2
Samples: 6
Max nTPM: 287.4
Min nTPM: 112.5
P10809_1015
181.2
P10809_1030
112.5
P10809_1049
272.5
P10809_1068
234.2
P10809_1085
287.4
P10809_1112
215.6
Naive CD8 T-cell nTPM: 101.8
Samples: 6
Max nTPM: 165.5
Min nTPM: 52.1
P10809_1016
77.0
P10809_1031
52.1
P10809_1050
96.7
P10809_1069
96.8
P10809_1087
165.5
P10809_1110
122.8
T-reg nTPM: 168.4
Samples: 6
Max nTPM: 239.0
Min nTPM: 111.3
P10809_1018
128.5
P10809_1037
111.3
P10809_1056
173.8
P10809_1075
152.6
P10809_1094
239.0
P10809_1106
205.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
385.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 206.2
Samples: 4
Max nTPM: 228.9
Min nTPM: 178.2
RHH5202_R3573
219.7
RHH5230_R3602
197.8
RHH5259_R3631
178.2
RHH5288_R3660
228.9
Effector memory CD8 T-cell nTPM: 351.5
Samples: 4
Max nTPM: 495.8
Min nTPM: 256.8
RHH5203_R3574
256.8
RHH5231_R3603
495.8
RHH5260_R3632
303.2
RHH5289_R3661
350.0
MAIT T-cell nTPM: 154.1
Samples: 4
Max nTPM: 213.8
Min nTPM: 57.6
RHH5233_R3605
213.8
RHH5205_R3576
57.6
RHH5262_R3634
175.0
RHH5297_R3663
170.0
Memory CD4 T-cell TFH nTPM: 385.5
Samples: 4
Max nTPM: 591.6
Min nTPM: 280.2
RHH5300_R3666
311.6
RHH5236_R3608
591.6
RHH5265_R3637
358.5
RHH5208_R3579
280.2
Memory CD4 T-cell Th1 nTPM: 310.8
Samples: 4
Max nTPM: 391.0
Min nTPM: 192.6
RHH5210_R3581
192.6
RHH5302_R3668
391.0
RHH5238_R3610
307.6
RHH5267_R3639
352.0
Memory CD4 T-cell Th1/Th17 nTPM: 255.9
Samples: 4
Max nTPM: 283.0
Min nTPM: 227.8
RHH5303_R3669
283.0
RHH5211_R3582
258.0
RHH5239_R3611
227.8
RHH5268_R3640
254.7
Memory CD4 T-cell Th17 nTPM: 264.3
Samples: 4
Max nTPM: 386.9
Min nTPM: 221.6
RHH5304_R3670
224.8
RHH5212_R3583
221.6
RHH5240_R3612
386.9
RHH5269_R3641
223.7
Memory CD4 T-cell Th2 nTPM: 301.0
Samples: 4
Max nTPM: 371.3
Min nTPM: 217.6
RHH5305_R3671
291.5
RHH5213_R3584
217.6
RHH5241_R3613
371.3
RHH5270_R3642
323.4
Naive CD4 T-cell nTPM: 294.8
Samples: 4
Max nTPM: 347.2
Min nTPM: 224.9
RHH5306_R3672
327.6
RHH5214_R3585
224.9
RHH5242_R3614
279.4
RHH5271_R3643
347.2
Naive CD8 T-cell nTPM: 139.2
Samples: 4
Max nTPM: 147.1
Min nTPM: 131.3
RHH5201_R3572
131.3
RHH5229_R3601
137.1
RHH5258_R3630
147.1
RHH5287_R3659
141.2
Non-Vd2 gdTCR nTPM: 203.8
Samples: 4
Max nTPM: 304.8
Min nTPM: 66.3
RHH5235_R3607
245.7
RHH5264_R3636
304.8
RHH5207_R3578
66.3
RHH5299_R3665
198.2
T-reg nTPM: 245.2
Samples: 4
Max nTPM: 446.2
Min nTPM: 120.0
RHH5301_R3667
227.5
RHH5237_R3609
446.2
RHH5266_R3638
187.1
RHH5209_R3580
120.0
Terminal effector memory CD4 T-cell nTPM: 318.9
Samples: 2
Max nTPM: 338.1
Min nTPM: 299.6
RHH5243_R3615
299.6
RHH5272_R3644
338.1
Terminal effector memory CD8 T-cell nTPM: 233.5
Samples: 4
Max nTPM: 324.0
Min nTPM: 116.2
RHH5232_R3604
324.0
RHH5204_R3575
116.2
RHH5261_R3633
274.3
RHH5296_R3662
219.6
Vd2 gdTCR nTPM: 229.9
Samples: 4
Max nTPM: 287.2
Min nTPM: 120.4
RHH5234_R3606
282.9
RHH5206_R3577
120.4
RHH5263_R3635
287.2
RHH5298_R3664
228.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.