HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:30.1 nTPM
HPA:30.1 nTPM
GTEx:33.1 nTPM
FANTOM5:65.3 Scaled Tags Per Million
Pig:32.0 nTPM
Mouse:34.8 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023143Antibody HPA023147Antibody CAB015202
Glial cells Not detectedLowLow
Neuronal cells MediumHighMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.1
Sample id Sample description nTPM
Hippocampus
nTPM: 25.3
2529 Female, age 94, left hemisphere 30.0
1898 Male, age 80, left hemisphere 29.3
2148 Female, age 91, left hemisphere 24.9
2621 Female, age 67, right hemisphere 24.2
1855 Male, age 76, left hemisphere 23.1
1911 Female, age 85, right hemisphere 20.4
Dentate gyrus
nTPM: 25.7
2530 Female, age 94, left hemisphere 29.3
1927 Female, age 91, both hemispheres 28.4
2010 Male, age 76, both hemispheres 25.9
2528 Male, age 74, both hemispheres 24.3
2246 Female, age 85, both hemispheres 24.2
2531 Female, age 67, both hemispheres 22.2
Entorhinal gyrus
nTPM: 27.5
2686 Male, age 75, right hemisphere 29.6
1787 Male, age 76, left hemisphere 29.1
1938 Female, age 85, left hemisphere 28.2
2613 Female, age 94, left hemisphere 26.5
2764 Male, age 80, right hemisphere 26.0
2117 Female, age 91, right hemisphere 25.8
Hippocampus, CA1
nTPM: 26.2
2749 Male, age 80, left hemisphere 31.8
1873 Female, age 85, both hemispheres 26.7
2527 Male, age 74, both hemispheres 26.0
2045 Male, age 76, both hemispheres 23.3
2082 Female, age 91, right hemisphere 23.2
Hippocampus, CA2
nTPM: 27.8
1892 Male, age 76, both hemispheres 36.0
1963 Male, age 80, left hemisphere 34.0
2437 Female, age 94, left hemisphere 26.9
2113 Female, age 91, right hemisphere 25.0
2249 Male, age 74, both hemispheres 24.3
1940 Female, age 85, left hemisphere 20.5
Hippocampus, CA3
nTPM: 25.9
2137 Male, age 80, left hemisphere 38.5
1867 Male, age 76, both hemispheres 29.7
2620 Female, age 94, left hemisphere 25.9
1891 Female, age 85, both hemispheres 22.3
2861 Female, age 67, both hemispheres 20.0
2436 Male, age 74, both hemispheres 19.2
Parahippocampal cortex
nTPM: 26.3
1850 Male, age 80, both hemispheres 34.6
1990 Female, age 91, right hemisphere 29.0
2532 Female, age 72, left hemisphere 27.7
1933 Female, age 85, both hemispheres 27.6
2692 Male, age 74, both hemispheres 26.9
2245 Female, age 91, both hemispheres 25.3
2693 Female, age 94, both hemispheres 24.9
2018 Male, age 76, both hemispheres 24.1
2622 Female, age 67, right hemisphere 22.7
2250 Female, age 67, right hemisphere 20.6
Perirhinal gyrus
nTPM: 30.1
1794 Male, age 80, right hemisphere 37.4
1847 Female, age 91, left hemisphere 33.0
1841 Female, age 85, right hemisphere 30.6
2848 Male, age 76, right hemisphere 28.8
2521 Female, age 94, right hemisphere 20.6
Subiculum
nTPM: 26.0
1901 Male, age 80, both hemispheres 29.9
2438 Female, age 94, left hemisphere 29.5
1977 Female, age 85, both hemispheres 25.4
2729 Female, age 91, right hemisphere 24.9
2619 Male, age 74, both hemispheres 24.0
2042 Male, age 76, both hemispheres 22.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.1
Samples: 197

Max nTPM: 59.9
Min nTPM: 10.6
Std nTPM: 7.3
Median nTPM: 31.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 59.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 56.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 54.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 53.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 51.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 50.3
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 49.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 49.3
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 48.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 47.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 47.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 65.3
FF:10169-103B7 60 years, female 75.3
FF:10153-102I9 76 years, female 55.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 32.0
Samples: 4

Max nTPM: 38.5
Min nTPM: 23.0
Sample A Female 36.8
Sample B Female 29.5
Sample C Male 38.5
Sample D Male 23.0
Entorhinal cortex
nTPM: 26.2
Samples: 4

Max nTPM: 30.4
Min nTPM: 23.3
Sample A Female 25.8
Sample B Female 30.4
Sample C Male 23.3
Sample D Male 25.4
Subiculum
nTPM: 25.9
Samples: 4

Max nTPM: 31.3
Min nTPM: 21.5
Sample A Female 31.3
Sample B Female 25.6
Sample C Male 25.0
Sample D Male 21.5
Ventral hippocampus
nTPM: 26.2
Samples: 4

Max nTPM: 32.6
Min nTPM: 21.2
Sample A Female 26.3
Sample B Female 21.2
Sample C Male 24.8
Sample D Male 32.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 34.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.2
Samples: 4

Max nTPM: 36.4
Min nTPM: 27.2
Sample A Male 34.8
Sample B Male 36.4
Sample C Female 30.4
Sample D Female 27.2
Hippocampal formation
nTPM: 34.8
Samples: 4

Max nTPM: 37.2
Min nTPM: 32.6
Sample A Male 37.2
Sample B Male 35.6
Sample C Female 33.9
Sample D Female 32.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
69626693 Antisense, RP_050428_01_B07, Mouse strain C57BL/6J (56 days, male) 1.2

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