COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:3.2 nTPM
HPA:3.2 nTPM
GTEx:2.3 nTPM
FANTOM5:5.9 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA028954
Endothelial cells Medium
Glandular cells High



COLON - HPA RNA-seqi
Average nTPM 3.2
overview
Male, age 54 		Colon sample 67
nTPM: 2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 2.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 5.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 1.8
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 3.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 6.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 2.1
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 2.1
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 4.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 5.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 1.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 2.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 0.4
Samples: 373

Max nTPM: 5.2
Min nTPM: 0.0
Std nTPM: 0.6
Median nTPM: 0.2
GTEX-X5EB-1126-SM-46MVV 40-49 years, male 5.2
GTEX-13W3W-2226-SM-5LU4M 60-69 years, female 4.8
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 4.7
GTEX-15FZZ-1826-SM-6LLJP 30-39 years, female 3.3
GTEX-Y8E4-2326-SM-EAZAZ 40-49 years, male 3.1
GTEX-1HB9E-2526-SM-D4P35 50-59 years, male 2.6
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 2.5
GTEX-WYJK-2326-SM-4ONDN 50-59 years, male 2.3
GTEX-WHSE-2726-SM-EZ6ML 20-29 years, male 2.2
GTEX-1PFEY-1726-SM-DPRZ4 30-39 years, male 2.0
GTEX-V955-1726-SM-4JBHF 60-69 years, male 1.9
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Colon - Transverse
Average nTPM: 2.3
Samples: 406

Max nTPM: 22.3
Min nTPM: 0.0
Std nTPM: 2.4
Median nTPM: 1.5
GTEX-OOBJ-1426-SM-E6CHH 60-69 years, male 22.3
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 12.0
GTEX-147GR-2726-SM-664OO 60-69 years, male 11.2
GTEX-1C4CL-2126-SM-7IGQC 30-39 years, male 10.5
GTEX-WHSB-0926-SM-4M1XJ 50-59 years, male 10.3
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 10.2
GTEX-1IKOE-2026-SM-AHZ31 30-39 years, female 9.7
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 9.3
GTEX-1B8KZ-1326-SM-7DUG6 50-59 years, male 8.2
GTEX-144GN-1126-SM-5LU33 50-59 years, male 8.1
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 8.0
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 5.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 5.9
FF:10014-101C5 62,83,84 years, mixed 5.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.