CASS4

COLON - Expression summary

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RNA expression

HPA:1.0 FPKM
GTEx:0.2 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody CAB034217

 

Endothelial cells

Medium  

Glandular cells

Medium  

Peripheral nerve/ganglion

Low  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

1.0

overview Male, age 54
Sample 1
FPKM: 0.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 1.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 0.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 2.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 0.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 0.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

0.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.2
Samples: 149

Max RPKM: 0.6
Min RPKM: 0
Std RPKM: 0.1
Median RPKM: 0.2
GTEX-13X6I-2726-SM-5Q5ET 0.6
GTEX-ZV6S-1126-SM-57WE9 0.6
GTEX-YEC3-2026-SM-4WWFL 0.6
GTEX-11TT1-0926-SM-5GU5M 0.6
GTEX-139D8-2926-SM-5IJBM 0.5
GTEX-14C39-1626-SM-5S2P4 0.5
GTEX-ZQG8-2426-SM-57WEE 0.5
GTEX-Y114-1626-SM-4TT7I 0.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 0.3
Samples: 196

Max RPKM: 1.6
Min RPKM: 0
Std RPKM: 0.1
Median RPKM: 0.2
GTEX-14C38-2626-SM-5RQI4 1.6
GTEX-13FTW-1826-SM-5IJEN 0.8
GTEX-13O3O-2526-SM-5L3DR 0.8
GTEX-12C56-0626-SM-5EGGC 0.7
GTEX-SE5C-1526-SM-4BRWU 0.7
GTEX-P78B-1726-SM-3P5ZV 0.6
GTEX-UPIC-1726-SM-4IHKG 0.6
GTEX-139T6-1326-SM-5IFFO 0.6
Show all