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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
52.1
nTPM
HPA Brain:
66.5
nTPM
GTEx:
52.1
nTPM
FANTOM5:
103.3
Scaled Tags Per Million
Pig:
27.2
nTPM
Mouse:
4.1
nTPM
Allen mouse:
6.5
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
66.5
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 60.6
1830
Male, age 51, unknown
72.3
1870
Female, age 42, unknown
68.4
2019
Male, age 18, unknown
66.6
1833
Male, age 53, unknown
66.5
2411
Female, age 72, unknown
63.6
1827
Male, age 72, unknown
60.3
2828
Female, age 72, unknown
60.1
2666
Male, age 74, left hemisphere
58.3
2219
Male, age 76, both hemispheres
48.9
2586
Male, age 75, left hemisphere
41.6
Dorsal raphe nucleus nTPM: 58.2
2750
Male, age 76, both hemispheres
68.6
2016
Female, age 72, unknown
62.5
2047
Male, age 72, unknown
55.9
1828
Male, age 53, unknown
53.7
2298
Female, age 72, unknown
50.2
Inferior colliculus nTPM: 58.7
1890
Male, age 53, unknown
63.2
2097
Female, age 72, unknown
59.6
1848
Female, age 42, unknown
57.4
2849
Male, age 72, unknown
54.7
Median raphe nucleus nTPM: 60.0
2220
Male, age 76, midline
60.0
Periaquaductal grey, anterior nTPM: 52.4
1947
Male, age 18, unknown
53.5
2502
Female, age 75, unknown
53.0
1795
Male, age 51, unknown
50.8
Periaquaductal grey, dorsal nTPM: 59.8
2850
Male, age 76, both hemispheres
64.8
1831
Male, age 72, unknown
59.6
2464
Female, age 72, unknown
58.8
1840
Male, age 53, unknown
56.0
Periaquaductal grey, lateral nTPM: 61.3
2272
Male, age 74, both hemispheres
64.4
2140
Male, age 76, both hemispheres
63.8
2053
Male, age 18, unknown
55.7
Pretectal area nTPM: 56.9
2316
Male, age 76, right hemisphere
62.9
2273
Male, age 74, both hemispheres
62.8
2007
Male, age 72, unknown
59.0
1815
Male, age 53, unknown
58.4
2825
Male, age 18, unknown
57.6
1944
Female, age 72, unknown
57.3
1817
Female, age 42, unknown
57.0
2224
Female, age 72, unknown
56.1
2407
Male, age 75, both hemispheres
54.4
2667
Female, age 75, unknown
51.0
1816
Male, age 51, unknown
50.0
Red nucleus nTPM: 66.5
2823
Male, age 76, right hemisphere
79.9
2503
Female, age 72, unknown
74.8
2785
Male, age 18, unknown
71.5
1904
Male, age 53, unknown
71.4
1865
Male, age 51, unknown
71.3
1954
Female, age 42, unknown
67.3
1821
Female, age 72, unknown
66.4
2227
Male, age 72, unknown
64.1
2769
Male, age 72, unknown
62.4
2588
Male, age 74, left hemisphere
57.9
2584
Male, age 75, left hemisphere
55.8
2725
Female, age 75, unknown
55.8
Substantia nigra nTPM: 55.6
2590
Female, age 75, unknown
69.2
2583
Male, age 75, right hemisphere
62.0
1889
Female, age 72, unknown
61.8
2699
Male, age 18, unknown
56.0
2409
Female, age 72, unknown
55.6
2665
Male, age 74, both hemispheres
55.3
2241
Male, age 72, unknown
53.9
1851
Male, age 51, unknown
51.0
1941
Male, age 53, unknown
48.6
1916
Female, age 42, unknown
42.8
Superior colliculus nTPM: 59.3
1913
Female, age 42, unknown
74.5
1995
Male, age 72, unknown
69.7
2587
Male, age 74, left hemisphere
66.0
1895
Male, age 76, right hemisphere
61.3
2668
Female, age 75, unknown
60.9
2087
Female, age 72, unknown
60.7
1839
Male, age 51, unknown
57.1
1796
Male, age 53, unknown
54.2
2261
Male, age 18, unknown
50.8
2664
Male, age 75, both hemispheres
37.7
Ventral tegmental area nTPM: 56.0
2223
Female, age 72, unknown
61.3
2021
Male, age 53, unknown
59.2
1942
Male, age 51, unknown
55.7
2218
Male, age 76, both hemispheres
54.3
2410
Female, age 72, unknown
53.5
1915
Female, age 42, unknown
52.0
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
52.1
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 52.1
Samples: 139
Max nTPM: 122.4
Min nTPM: 19.7
Std nTPM: 15.2
Median nTPM: 50.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
122.4
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
94.2
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
93.1
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
91.3
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
90.7
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
90.4
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
83.7
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
79.6
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
79.3
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
75.5
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
72.6
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
70.7
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
69.4
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
68.8
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
68.3
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
67.3
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
67.1
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
66.9
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
66.6
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
66.6
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
66.5
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
66.2
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
65.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
64.3
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
63.1
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
63.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
62.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
62.4
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
62.0
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
61.1
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
60.7
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
60.0
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
60.0
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
59.1
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
58.9
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
58.4
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
58.2
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
58.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
57.9
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
57.7
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
57.6
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
57.4
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
56.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
56.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
56.4
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
56.0
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
55.7
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
55.4
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
55.4
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
55.0
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
54.9
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
54.1
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
53.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
53.9
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
53.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
53.5
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
53.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
52.9
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
52.2
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
52.0
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
51.5
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
51.4
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
51.1
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
51.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
51.0
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
50.8
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
50.7
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
50.7
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
50.6
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
50.3
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
49.9
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
49.8
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
49.3
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
49.2
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
48.9
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
48.8
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
48.7
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
48.3
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
47.7
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
47.7
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
47.5
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
47.2
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
47.0
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
46.9
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
46.9
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
46.6
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
46.1
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
46.1
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
46.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
46.0
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
45.9
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
45.2
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
45.0
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
44.8
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
44.4
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
44.2
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
43.8
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
43.7
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
43.3
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
43.2
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
42.6
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
42.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
42.5
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
42.4
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
42.3
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
42.3
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
42.1
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
42.0
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
41.9
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
41.7
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
41.7
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
41.6
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
41.2
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
41.1
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
39.9
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
39.8
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
39.5
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
39.1
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
39.1
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
38.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
37.6
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
37.3
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
36.9
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
36.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
36.3
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
36.3
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
35.9
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
34.4
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
33.9
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
33.8
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
33.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
32.3
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
32.3
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
31.1
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
27.3
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
26.2
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
23.3
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
20.8
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
19.7
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
4.1
Mouse sample
Sample description
nTPM
Midbrain nTPM: 4.1
Samples: 4
Max nTPM: 4.3
Min nTPM: 4.0
Sample A
Male
4.1
Sample B
Male
4.0
Sample C
Female
4.3
Sample D
Female
4.1
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.