EFNB1

GENERAL INFORMATION

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Gene name

EFNB1

Gene description

Ephrin-B1

Protein class

Cancer-related genes
Disease related genes
Plasma proteins
Predicted membrane proteins

Predicted localization

Membrane

Number of transcripts

1
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HUMAN PROTEIN ATLAS INFORMATION

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RNA tissue category

HPA:Expressed in all
GTEx:Expressed in all

Protein evidence

Evidence at protein level

Protein localization

Most of the normal cells displayed moderate to strong cytoplasmic positivity which often showed membranous accentuation.

ANTIBODY RELIABILITY

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Data reliability
description

Pending RNA-based expert annotation.

Data reliability

Uncertain based on 1 antibody.
CAB031489
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RNA AND PROTEIN EXPRESSION SUMMARY

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RNA expression (FPKM) Protein expression (score)
Brain
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis



PROTEIN EXPRESSION OVERVIEW

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Organ

Expression



RNA EXPRESSION OVERVIEW

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HPA dataset
RNA tissue category:  Expressed in all

Organ

Expression

GTEx dataset
RNA tissue category:  Expressed in all

Organ

Expression



GENE INFORMATION

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Gene name

EFNB1 (HGNC Symbol)

Synonyms

CFNS, Elk-L, EPLG2, LERK2

Description

Ephrin-B1 (HGNC Symbol)

Entrez gene summary

The protein encoded by this gene is a type I membrane protein and a ligand of Eph-related receptor tyrosine kinases. It may play a role in cell adhesion and function in the development or maintenance of the nervous system. [provided by RefSeq, Jul 2008]

Chromosome

X

Cytoband

q13.1

Chromosome location (bp)

68828997 - 68842147

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000090776 (version 78.38)

Entrez gene

1947

UniProt

P98172 (UniProt - Evidence at protein level)

neXtProt

NX_P98172

Antibodypedia

EFNB1 antibodies


PROTEIN BROWSER

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ENST00000204961
 
 
 
 


PROTEIN INFORMATION

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Splice variant

Ensembl

UniProt

Protein class

Gene ontology

Length
(aa)

Molecular mass
(kDa)

Signal peptide
(predicted)

Transmembrane regions
(predicted)

EFNB1-001 ENSP00000204961
ENST00000204961
P98172
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