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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
197.5
nTPM
HPA Brain:
161.6
nTPM
GTEx:
197.5
nTPM
FANTOM5:
172.0
Scaled Tags Per Million
Pig:
367.9
nTPM
Mouse:
178.5
nTPM
Allen mouse:
14.5
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
161.6
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 140.5
2019
Male, age 18, unknown
196.0
2828
Female, age 72, unknown
172.1
2586
Male, age 75, left hemisphere
163.3
2219
Male, age 76, both hemispheres
145.6
1827
Male, age 72, unknown
137.2
2411
Female, age 72, unknown
134.6
2666
Male, age 74, left hemisphere
129.2
1870
Female, age 42, unknown
110.9
1833
Male, age 53, unknown
110.5
1830
Male, age 51, unknown
105.1
Dorsal raphe nucleus nTPM: 139.5
1828
Male, age 53, unknown
167.6
2298
Female, age 72, unknown
149.0
2750
Male, age 76, both hemispheres
141.0
2047
Male, age 72, unknown
135.6
2016
Female, age 72, unknown
104.4
Inferior colliculus nTPM: 132.8
2097
Female, age 72, unknown
166.2
1890
Male, age 53, unknown
133.3
1848
Female, age 42, unknown
121.3
2849
Male, age 72, unknown
110.5
Median raphe nucleus nTPM: 130.7
2220
Male, age 76, midline
130.7
Periaquaductal grey, anterior nTPM: 159.7
1795
Male, age 51, unknown
172.8
2502
Female, age 75, unknown
166.0
1947
Male, age 18, unknown
140.1
Periaquaductal grey, dorsal nTPM: 101.7
1840
Male, age 53, unknown
103.7
2464
Female, age 72, unknown
102.4
1831
Male, age 72, unknown
100.8
2850
Male, age 76, both hemispheres
99.8
Periaquaductal grey, lateral nTPM: 121.8
2272
Male, age 74, both hemispheres
154.9
2140
Male, age 76, both hemispheres
120.1
2053
Male, age 18, unknown
90.5
Pretectal area nTPM: 161.6
2007
Male, age 72, unknown
224.1
1817
Female, age 42, unknown
207.3
1944
Female, age 72, unknown
188.6
1816
Male, age 51, unknown
182.5
2667
Female, age 75, unknown
172.8
1815
Male, age 53, unknown
160.1
2273
Male, age 74, both hemispheres
148.3
2224
Female, age 72, unknown
132.5
2316
Male, age 76, right hemisphere
129.2
2825
Male, age 18, unknown
118.7
2407
Male, age 75, both hemispheres
114.2
Red nucleus nTPM: 147.5
2785
Male, age 18, unknown
201.0
2503
Female, age 72, unknown
166.2
2725
Female, age 75, unknown
158.3
2227
Male, age 72, unknown
157.7
2769
Male, age 72, unknown
156.5
1821
Female, age 72, unknown
146.0
1954
Female, age 42, unknown
140.2
2588
Male, age 74, left hemisphere
136.8
1865
Male, age 51, unknown
130.7
2584
Male, age 75, left hemisphere
128.0
1904
Male, age 53, unknown
127.2
2823
Male, age 76, right hemisphere
120.9
Substantia nigra nTPM: 158.4
1916
Female, age 42, unknown
229.7
1851
Male, age 51, unknown
195.0
1941
Male, age 53, unknown
189.9
1889
Female, age 72, unknown
175.6
2665
Male, age 74, both hemispheres
150.7
2583
Male, age 75, right hemisphere
136.8
2699
Male, age 18, unknown
134.0
2590
Female, age 75, unknown
130.2
2241
Male, age 72, unknown
130.1
2409
Female, age 72, unknown
111.5
Superior colliculus nTPM: 136.0
1796
Male, age 53, unknown
161.8
2087
Female, age 72, unknown
158.4
2261
Male, age 18, unknown
157.8
2664
Male, age 75, both hemispheres
141.8
2587
Male, age 74, left hemisphere
132.0
2668
Female, age 75, unknown
129.3
1839
Male, age 51, unknown
127.9
1995
Male, age 72, unknown
119.5
1895
Male, age 76, right hemisphere
116.4
1913
Female, age 42, unknown
115.3
Ventral tegmental area nTPM: 153.1
1915
Female, age 42, unknown
178.8
2218
Male, age 76, both hemispheres
178.4
2410
Female, age 72, unknown
172.7
1942
Male, age 51, unknown
147.0
2223
Female, age 72, unknown
126.6
2021
Male, age 53, unknown
114.8
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
197.5
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 197.5
Samples: 139
Max nTPM: 471.6
Min nTPM: 63.6
Std nTPM: 63.5
Median nTPM: 197.2
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
471.6
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
362.1
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
353.2
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
348.5
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
313.1
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
302.0
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
300.1
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
299.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
293.3
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
287.9
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
276.0
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
274.9
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
273.7
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
273.1
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
265.6
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
264.5
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
263.6
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
256.5
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
252.7
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
251.8
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
251.5
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
251.0
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
250.8
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
250.2
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
249.7
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
249.6
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
249.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
245.4
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
242.1
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
241.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
241.4
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
241.3
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
240.7
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
235.5
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
232.9
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
231.9
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
231.6
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
231.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
231.1
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
230.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
229.6
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
228.8
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
228.4
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
226.6
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
224.7
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
223.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
223.6
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
222.7
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
221.6
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
221.4
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
217.1
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
214.5
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
212.7
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
211.9
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
211.5
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
210.1
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
209.5
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
209.2
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
208.7
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
206.9
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
206.2
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
206.0
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
205.6
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
205.6
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
203.6
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
203.2
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
198.6
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
198.2
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
197.3
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
197.2
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
196.7
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
196.4
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
195.7
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
194.4
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
194.0
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
193.9
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
193.1
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
193.0
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
190.7
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
190.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
188.6
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
186.5
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
184.4
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
182.5
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
182.0
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
180.9
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
180.7
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
179.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
179.4
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
176.7
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
176.5
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
173.7
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
172.6
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
171.1
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
171.0
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
170.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
167.5
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
164.9
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
164.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
163.4
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
161.4
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
161.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
153.5
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
153.5
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
152.7
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
150.1
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
146.6
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
146.5
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
145.6
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
143.2
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
142.6
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
142.0
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
141.6
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
137.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
135.4
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
135.2
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
133.6
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
133.0
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
130.9
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
130.5
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
129.4
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
123.5
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
121.6
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
120.0
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
119.5
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
118.4
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
117.0
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
115.0
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
103.0
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
101.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
100.5
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
99.0
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
87.8
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
84.5
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
83.1
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
81.2
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
78.2
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
73.9
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
63.6
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
178.5
Mouse sample
Sample description
nTPM
Midbrain nTPM: 178.6
Samples: 4
Max nTPM: 213.9
Min nTPM: 152.3
Sample A
Male
213.9
Sample B
Male
168.1
Sample C
Female
152.3
Sample D
Female
179.9
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.