HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:27.1 nTPM
HPA Brain:30.6 nTPM
GTEx:27.1 nTPM
FANTOM5:9.5 Scaled Tags Per Million
Pig:12.0 nTPM
Mouse:9.3 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006366
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.6
Sample id Sample description nTPM
Hippocampus
nTPM: 28.8
2529 Female, age 94, left hemisphere 32.7
1911 Female, age 85, right hemisphere 30.3
2621 Female, age 67, right hemisphere 29.8
1898 Male, age 80, left hemisphere 27.7
2148 Female, age 91, left hemisphere 27.1
1855 Male, age 76, left hemisphere 25.3
Dentate gyrus
nTPM: 29.2
2530 Female, age 94, left hemisphere 33.0
2531 Female, age 67, both hemispheres 32.9
2528 Male, age 74, both hemispheres 29.5
1927 Female, age 91, both hemispheres 27.1
2010 Male, age 76, both hemispheres 27.1
2246 Female, age 85, both hemispheres 25.8
Entorhinal gyrus
nTPM: 30.6
2613 Female, age 94, left hemisphere 35.4
2764 Male, age 80, right hemisphere 34.6
2117 Female, age 91, right hemisphere 32.6
1938 Female, age 85, left hemisphere 28.2
1787 Male, age 76, left hemisphere 27.6
2686 Male, age 75, right hemisphere 24.9
Hippocampus, CA1
nTPM: 28.0
2749 Male, age 80, left hemisphere 37.1
2527 Male, age 74, both hemispheres 30.5
2082 Female, age 91, right hemisphere 26.8
1873 Female, age 85, both hemispheres 26.3
2045 Male, age 76, both hemispheres 19.2
Hippocampus, CA2
nTPM: 29.1
1963 Male, age 80, left hemisphere 35.2
2437 Female, age 94, left hemisphere 31.6
2249 Male, age 74, both hemispheres 28.7
2113 Female, age 91, right hemisphere 28.3
1940 Female, age 85, left hemisphere 26.3
1892 Male, age 76, both hemispheres 24.4
Hippocampus, CA3
nTPM: 29.9
2620 Female, age 94, left hemisphere 36.3
2137 Male, age 80, left hemisphere 33.3
2861 Female, age 67, both hemispheres 31.6
2436 Male, age 74, both hemispheres 27.8
1891 Female, age 85, both hemispheres 25.8
1867 Male, age 76, both hemispheres 24.5
Parahippocampal cortex
nTPM: 26.8
1990 Female, age 91, right hemisphere 30.7
2245 Female, age 91, both hemispheres 29.1
2532 Female, age 72, left hemisphere 27.8
2622 Female, age 67, right hemisphere 27.6
2250 Female, age 67, right hemisphere 27.4
1933 Female, age 85, both hemispheres 27.0
2018 Male, age 76, both hemispheres 24.9
2692 Male, age 74, both hemispheres 24.9
1850 Male, age 80, both hemispheres 24.3
2693 Female, age 94, both hemispheres 23.7
Perirhinal gyrus
nTPM: 25.2
1794 Male, age 80, right hemisphere 28.5
2521 Female, age 94, right hemisphere 28.2
1847 Female, age 91, left hemisphere 25.2
1841 Female, age 85, right hemisphere 23.8
2848 Male, age 76, right hemisphere 20.2
Subiculum
nTPM: 27.1
1977 Female, age 85, both hemispheres 32.1
2042 Male, age 76, both hemispheres 29.1
1901 Male, age 80, both hemispheres 29.0
2619 Male, age 74, both hemispheres 26.7
2729 Female, age 91, right hemisphere 24.7
2438 Female, age 94, left hemisphere 21.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.1
Samples: 197

Max nTPM: 55.8
Min nTPM: 12.8
Std nTPM: 7.3
Median nTPM: 26.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 55.8
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 50.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 48.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 45.8
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 45.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 44.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 43.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 43.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 42.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 41.2
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 39.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.5
FF:10153-102I9 76 years, female 10.6
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.0
Pig sample Sample description nTPM
Subiculum
nTPM: 10.8
Samples: 4

Max nTPM: 13.7
Min nTPM: 8.9
Sample A Female 13.7
Sample B Female 9.3
Sample C Male 11.1
Sample D Male 8.9
Dorsal hippocampus
nTPM: 11.3
Samples: 4

Max nTPM: 13.6
Min nTPM: 8.7
Sample A Female 13.6
Sample B Female 11.3
Sample C Male 11.6
Sample D Male 8.7
Entorhinal cortex
nTPM: 10.8
Samples: 4

Max nTPM: 11.6
Min nTPM: 9.7
Sample A Female 11.6
Sample B Female 10.6
Sample C Male 11.3
Sample D Male 9.7
Ventral hippocampus
nTPM: 12.1
Samples: 4

Max nTPM: 15.7
Min nTPM: 8.8
Sample A Female 11.9
Sample B Female 8.8
Sample C Male 15.7
Sample D Male 11.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.7
Samples: 4

Max nTPM: 9.9
Min nTPM: 7.7
Sample A Male 9.0
Sample B Male 8.3
Sample C Female 7.7
Sample D Female 9.9
Hippocampal formation
nTPM: 9.3
Samples: 4

Max nTPM: 11.1
Min nTPM: 8.1
Sample A Male 8.1
Sample B Male 9.0
Sample C Female 9.0
Sample D Female 11.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
69816697 Antisense, RP_050510_01_F08, Mouse strain C57BL/6J (56 days, male) 0.6

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