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TISSUE MEDULLA OBLONGATA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
Dictionary
Tissue proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:86.6 nTPM
HPA:86.6 nTPM
FANTOM5:14.6 Scaled Tags Per Million
Pig:87.6 nTPM
Allen mouse:12.5 Expression energy

MEDULLA OBLONGATA - Annotated protein expression
Pending normal tissue analysis

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 86.6
Sample id Sample description nTPM
Area postrema
nTPM: 16.3
2306 Male, age 80, both hemispheres 38.8
2054 Male, age 76, both hemispheres 10.2
2799 Male, age 61, both hemispheres 0.0
Cuneate nuclei
nTPM: 86.6
2131 Male, age 76, both hemispheres 118.0
2376 Male, age 61, both hemispheres 74.7
2381 Male, age 80, both hemispheres 67.0
Dorsal medullary reticular nucleus
nTPM: 75.4
2088 Male, age 76, both hemispheres 82.4
2040 Female, age 85, both hemispheres 78.5
2373 Male, age 61, both hemispheres 65.4
Dorsal motor vagal complex
nTPM: 33.1
2185 Male, age 76, both hemispheres 56.7
2000 Male, age 74, unknown 54.6
2133 Female, age 91, both hemispheres 50.0
2643 Male, age 74, both hemispheres 31.3
2844 Male, age 55, unknown 28.5
2797 Male, age 61, both hemispheres 21.8
2807 Female, age 85, both hemispheres 17.0
2813 Female, age 72, unknown 5.0
Gigantocellular reticular nuclei, medullary
nTPM: 72.7
2462 Male, age 74, both hemispheres 95.2
2310 Male, age 80, both hemispheres 80.4
2314 Male, age 61, both hemispheres 72.1
2387 Female, age 91, both hemispheres 69.2
2022 Male, age 76, right hemisphere 61.7
1876 Female, age 85, both hemispheres 57.7
Gigantocellular reticular nuclei, pars
nTPM: 71.3
2084 Female, age 85, both hemispheres 86.6
2168 Male, age 76, both hemispheres 80.9
2336 Male, age 61, both hemispheres 70.1
2330 Male, age 80, both hemispheres 62.5
2706 Male, age 80, both hemispheres 56.2
Inferior olive
nTPM: 39.7
2628 Female, age 91, both hemispheres 53.3
2178 Male, age 61, both hemispheres 47.7
2563 Male, age 74, both hemispheres 41.7
2085 Female, age 85, both hemispheres 38.5
2379 Male, age 80, both hemispheres 17.1
Lateral medullary reticular nucleus
nTPM: 48.5
2044 Male, age 76, both hemispheres 65.1
2305 Male, age 74, both hemispheres 56.9
2852 Male, age 80, both hemispheres 55.5
2190 Female, age 85, both hemispheres 49.0
2374 Male, age 61, both hemispheres 40.2
2804 Female, age 91, both hemispheres 24.4
Medial vestibular nucleus
nTPM: 72.1
2093 Male, age 80, both hemispheres 101.7
2624 Male, age 61, both hemispheres 85.9
2801 Male, age 74, both hemispheres 80.7
2803 Female, age 91, both hemispheres 60.3
2743 Female, age 85, both hemispheres 56.1
2134 Male, age 76, both hemispheres 47.8
Motor hypoglossal nucleus
nTPM: 60.7
2132 Female, age 85, both hemispheres 96.7
2125 Female, age 91, both hemispheres 88.6
2182 Male, age 80, both hemispheres 74.2
2461 Male, age 61, both hemispheres 32.3
2277 Male, age 76, both hemispheres 11.9
Nucleus ambiguus
nTPM: 74.8
2096 Female, age 85, both hemispheres 124.3
2071 Male, age 76, both hemispheres 25.3
Nucleus cuneatus
nTPM: 74.5
2100 Male, age 76, both hemispheres 129.3
2564 Male, age 74, both hemispheres 101.4
2805 Female, age 91, both hemispheres 57.0
2380 Male, age 80, both hemispheres 55.3
2808 Female, age 85, both hemispheres 54.7
2562 Male, age 61, both hemispheres 49.2
Nucleus gracilis
nTPM: 60.8
2382 Male, age 80, both hemispheres 64.4
2627 Male, age 74, both hemispheres 63.9
2299 Female, age 85, both hemispheres 54.2
Nucleus raphe magnus
nTPM: 80.5
2455 Male, age 74, both hemispheres 88.2
2172 Female, age 85, both hemispheres 86.3
2328 Male, age 80, both hemispheres 85.4
2459 Female, age 91, both hemispheres 84.5
2051 Male, age 76, both hemispheres 69.9
2160 Male, age 61, both hemispheres 69.0
Nucleus raphe obscurus
nTPM: 48.7
2800 Male, age 61, midline 62.1
2845 Female, age 85, midline 56.0
2142 Male, age 76, midline 27.9
Nucleus raphe pallidus
nTPM: 49.7
2183 Male, age 80, midline 64.3
1924 Male, age 61, midline 44.1
2145 Male, age 76, midline 40.8
Nucleus tractus solitarii
nTPM: 13.9
2307 Male, age 80, both hemispheres 18.2
2656 Male, age 76, both hemispheres 15.6
2144 Female, age 91, right hemisphere 11.3
2191 Female, age 85, both hemispheres 10.4
Parvicellular reticular nuclei
nTPM: 76.3
2558 Male, age 74, both hemispheres 112.2
2095 Male, age 76, both hemispheres 59.2
2119 Male, age 80, both hemispheres 57.5
Parvicellular reticular nuclei, medullary
nTPM: 66.0
2091 Female, age 85, both hemispheres 82.3
2189 Female, age 91, both hemispheres 58.1
2181 Male, age 80, left hemisphere 57.7
Peritrigeminal nucleus
nTPM: 63.8
2179 Male, age 61, both hemispheres 67.3
2067 Female, age 85, both hemispheres 63.5
2136 Male, age 76, both hemispheres 60.7
Prepositus hypoglossal nucleus
nTPM: 57.8
2855 Female, age 85, right hemisphere 68.3
2086 Male, age 80, both hemispheres 47.3
Spinal trigeminal nucleus, caudal
nTPM: 64.6
2447 Male, age 76, both hemispheres 102.9
2390 Female, age 91, both hemispheres 65.1
2308 Male, age 80, both hemispheres 64.7
2312 Male, age 61, both hemispheres 53.4
2642 Male, age 74, both hemispheres 37.1
Spinal trigeminal nucleus, interpolar
nTPM: 56.8
2066 Male, age 76, right hemisphere 69.8
2389 Female, age 91, both hemispheres 62.2
2033 Male, age 80, both hemispheres 58.1
2625 Male, age 61, both hemispheres 51.0
2386 Female, age 85, both hemispheres 42.7
Spinal vestibular nucleus
nTPM: 75.0
2748 Male, age 76, both hemispheres 88.5
2384 Male, age 74, both hemispheres 86.0
2780 Male, age 80, both hemispheres 82.4
2186 Female, age 91, both hemispheres 76.0
2806 Female, age 85, both hemispheres 64.5
2796 Male, age 61, both hemispheres 52.6
Ventral medullary reticular nucleus
nTPM: 65.4
2060 Male, age 76, both hemispheres 83.9
2372 Male, age 61, both hemispheres 46.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 55.0
1986 Male, age 76, both hemispheres 68.5
2741 Female, age 85, both hemispheres 64.6
2118 Male, age 80, both hemispheres 53.6
2180 Male, age 61, both hemispheres 47.6
2302 Female, age 91, both hemispheres 40.6

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 14.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 14.6
FF:10038-101F2 18-64 years, mixed 22.4
FF:10155-103A2 76 years, female 13.6
FF:10174-103C3 60 years, female 7.9

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 87.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 87.6
Samples: 4

Max nTPM: 104.2
Min nTPM: 53.3
Sample A Female 91.3
Sample B Female 101.5
Sample C Male 104.2
Sample D Male 53.3

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 12.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 12.5
73512185 Antisense, RP_050705_01_B04, Mouse strain C57BL/6J (56 days, male) 12.5
70723465 Antisense, RP_050705_01_B04, Mouse strain C57BL/6J (56 days, male) 11.5

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.