HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:11.7 nTPM
HPA Brain:22.0 nTPM
GTEx:11.7 nTPM
FANTOM5:6.1 Scaled Tags Per Million
Pig:15.9 nTPM
Mouse:5.6 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003747Antibody HPA019769
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.0
Sample id Sample description nTPM
Hippocampus
nTPM: 20.8
2529 Female, age 94, left hemisphere 26.4
1911 Female, age 85, right hemisphere 20.7
1855 Male, age 76, left hemisphere 19.8
2621 Female, age 67, right hemisphere 19.8
2148 Female, age 91, left hemisphere 19.6
1898 Male, age 80, left hemisphere 18.4
Dentate gyrus
nTPM: 20.7
2530 Female, age 94, left hemisphere 26.9
2528 Male, age 74, both hemispheres 23.1
2010 Male, age 76, both hemispheres 20.5
2246 Female, age 85, both hemispheres 19.5
2531 Female, age 67, both hemispheres 19.4
1927 Female, age 91, both hemispheres 14.5
Entorhinal gyrus
nTPM: 18.8
2117 Female, age 91, right hemisphere 23.5
2686 Male, age 75, right hemisphere 21.6
2764 Male, age 80, right hemisphere 18.4
1787 Male, age 76, left hemisphere 17.1
2613 Female, age 94, left hemisphere 16.5
1938 Female, age 85, left hemisphere 15.8
Hippocampus, CA1
nTPM: 17.2
2527 Male, age 74, both hemispheres 20.9
2082 Female, age 91, right hemisphere 20.5
1873 Female, age 85, both hemispheres 15.8
2045 Male, age 76, both hemispheres 15.5
2749 Male, age 80, left hemisphere 13.2
Hippocampus, CA2
nTPM: 19.8
2437 Female, age 94, left hemisphere 23.8
2113 Female, age 91, right hemisphere 22.2
1940 Female, age 85, left hemisphere 20.9
2249 Male, age 74, both hemispheres 20.6
1963 Male, age 80, left hemisphere 18.5
1892 Male, age 76, both hemispheres 13.0
Hippocampus, CA3
nTPM: 19.7
2436 Male, age 74, both hemispheres 24.8
2861 Female, age 67, both hemispheres 24.1
1891 Female, age 85, both hemispheres 19.1
1867 Male, age 76, both hemispheres 18.1
2620 Female, age 94, left hemisphere 17.5
2137 Male, age 80, left hemisphere 14.6
Parahippocampal cortex
nTPM: 18.0
2692 Male, age 74, both hemispheres 22.4
2018 Male, age 76, both hemispheres 20.4
2245 Female, age 91, both hemispheres 19.6
2622 Female, age 67, right hemisphere 19.5
2532 Female, age 72, left hemisphere 18.2
1990 Female, age 91, right hemisphere 17.5
2250 Female, age 67, right hemisphere 16.6
2693 Female, age 94, both hemispheres 15.9
1933 Female, age 85, both hemispheres 15.4
1850 Male, age 80, both hemispheres 14.7
Perirhinal gyrus
nTPM: 14.0
2521 Female, age 94, right hemisphere 16.0
1794 Male, age 80, right hemisphere 14.9
2848 Male, age 76, right hemisphere 13.5
1847 Female, age 91, left hemisphere 13.1
1841 Female, age 85, right hemisphere 12.6
Subiculum
nTPM: 22.0
2438 Female, age 94, left hemisphere 24.1
2042 Male, age 76, both hemispheres 24.0
2619 Male, age 74, both hemispheres 24.0
2729 Female, age 91, right hemisphere 23.5
1901 Male, age 80, both hemispheres 19.7
1977 Female, age 85, both hemispheres 16.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.7
Samples: 197

Max nTPM: 23.1
Min nTPM: 4.5
Std nTPM: 3.6
Median nTPM: 11.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 23.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 22.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 21.5
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 20.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 20.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 19.9
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 19.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 19.3
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 19.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 19.1
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 18.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 6.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 6.1
FF:10153-102I9 76 years, female 9.1
FF:10169-103B7 60 years, female 3.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.9
Pig sample Sample description nTPM
Subiculum
nTPM: 13.4
Samples: 4

Max nTPM: 17.2
Min nTPM: 9.6
Sample A Female 9.6
Sample B Female 13.8
Sample C Male 13.0
Sample D Male 17.2
Dorsal hippocampus
nTPM: 11.7
Samples: 4

Max nTPM: 16.5
Min nTPM: 8.0
Sample A Female 8.0
Sample B Female 11.6
Sample C Male 10.6
Sample D Male 16.5
Entorhinal cortex
nTPM: 15.8
Samples: 4

Max nTPM: 18.3
Min nTPM: 14.4
Sample A Female 16.0
Sample B Female 14.6
Sample C Male 14.4
Sample D Male 18.3
Ventral hippocampus
nTPM: 13.1
Samples: 4

Max nTPM: 16.7
Min nTPM: 11.0
Sample A Female 13.3
Sample B Female 16.7
Sample C Male 11.5
Sample D Male 11.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.6
Samples: 4

Max nTPM: 6.4
Min nTPM: 4.9
Sample A Male 6.4
Sample B Male 4.9
Sample C Female 5.0
Sample D Female 6.1
Hippocampal formation
nTPM: 3.9
Samples: 4

Max nTPM: 4.1
Min nTPM: 3.5
Sample A Male 3.9
Sample B Male 3.9
Sample C Female 3.5
Sample D Female 4.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
69262263 Antisense, RP_050303_01_D06, Mouse strain C57BL/6J (56 days, male) 0.4

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