We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
ANKRD54
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • ANKRD54
TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:10.9 nTPM
GTEx:10.9 nTPM
FANTOM5:26.9 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA071287
Squamous epithelial cells Medium


VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 10.9
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 10.9
Samples: 156

Max nTPM: 22.0
Min nTPM: 6.3
Std nTPM: 2.6
Median nTPM: 10.4
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 22.0
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 19.6
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 19.1
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 17.6
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 16.7
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 16.4
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 15.5
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 15.5
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 15.4
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 15.2
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 15.1
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 15.0
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 14.8
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 14.6
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 14.6
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 14.4
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 14.3
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 14.2
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 14.1
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 14.0
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 14.0
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 14.0
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 14.0
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 13.8
GTEX-11I78-2026-SM-5987C 50-59 years, female 13.7
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 13.3
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 13.2
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 13.0
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 12.8
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 12.8
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 12.7
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 12.7
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 12.6
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 12.5
GTEX-16NPV-2526-SM-6M483 50-59 years, female 12.5
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 12.5
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 12.5
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 12.4
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 12.2
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 12.2
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 12.1
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 12.1
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 12.1
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 12.0
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 11.9
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 11.9
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 11.7
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 11.7
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 11.7
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 11.6
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 11.6
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 11.5
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 11.5
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 11.5
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 11.4
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 11.4
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 11.4
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 11.3
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 11.1
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 11.0
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 11.0
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 10.9
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 10.9
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 10.9
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 10.9
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 10.8
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 10.7
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 10.7
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 10.7
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 10.6
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 10.6
GTEX-14PKU-1326-SM-6871B 40-49 years, female 10.6
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 10.6
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 10.5
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 10.5
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 10.4
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 10.4
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 10.4
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 10.4
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 10.4
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 10.4
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 10.4
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 10.3
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 10.3
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 10.3
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 10.3
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 10.2
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 10.2
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 10.2
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 10.1
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 10.1
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 10.1
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 10.0
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 10.0
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 9.9
GTEX-S341-1226-SM-4AD5S 40-49 years, female 9.9
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 9.9
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 9.8
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 9.8
GTEX-1C475-0526-SM-793AC 40-49 years, female 9.7
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 9.6
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 9.5
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 9.5
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 9.3
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 9.3
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 9.3
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 9.3
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 9.3
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 9.2
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 9.1
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 9.1
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 9.1
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 9.1
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 9.1
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 9.0
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 9.0
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 9.0
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 8.9
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 8.9
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 8.9
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 8.9
GTEX-QCQG-1226-SM-48U23 50-59 years, female 8.8
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 8.8
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 8.7
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 8.6
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 8.6
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 8.6
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 8.5
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 8.5
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 8.5
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 8.5
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 8.5
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 8.4
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 8.4
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 8.3
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 8.2
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 8.2
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 8.2
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 8.2
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 8.1
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 7.9
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 7.9
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 7.9
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 7.8
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 7.7
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 7.6
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 7.5
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 7.4
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 7.4
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 7.3
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 7.0
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 7.0
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 6.8
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 6.4
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 6.4
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 6.3
Show allShow less

VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 26.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 26.9
FF:10204-103F6 68 years, female 26.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.