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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:52.7 nTPM
GTEx:52.7 nTPM
FANTOM5:123.4 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA000827Antibody CAB009882
Squamous epithelial cells MediumMedium




VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 52.7
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 52.7
Samples: 156

Max nTPM: 104.1
Min nTPM: 32.0
Std nTPM: 11.3
Median nTPM: 50.8
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 104.1
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 85.9
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 84.5
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 82.7
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 78.4
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 78.0
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 77.7
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 76.6
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 76.6
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 70.1
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 69.1
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 68.0
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 67.9
GTEX-14PKU-1326-SM-6871B 40-49 years, female 67.2
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 67.0
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 66.8
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 65.0
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 64.5
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 64.0
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 63.6
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 63.0
GTEX-QCQG-1226-SM-48U23 50-59 years, female 62.9
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 62.5
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 62.4
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 62.4
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 62.3
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 62.3
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 62.3
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 62.2
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 62.0
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 61.7
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 61.4
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 61.3
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 60.9
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 60.9
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 60.6
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 60.1
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 59.5
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 59.2
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 59.2
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 58.8
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 58.7
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 58.3
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 57.6
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 57.3
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 57.3
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 57.1
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 57.1
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 56.5
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 56.5
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 56.4
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 55.9
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 55.8
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 55.7
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 55.0
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 54.7
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 54.3
GTEX-S341-1226-SM-4AD5S 40-49 years, female 54.3
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 54.1
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 54.1
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 53.9
GTEX-11I78-2026-SM-5987C 50-59 years, female 53.5
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 53.3
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 53.3
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 53.2
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 53.1
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 52.8
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 52.6
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 52.6
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 52.4
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 52.3
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 52.3
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 52.0
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 51.8
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 51.2
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 51.2
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 51.0
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 50.9
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 50.8
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 50.6
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 50.2
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 50.1
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 50.0
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 49.8
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 49.7
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 49.7
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 49.6
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 49.6
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 49.6
GTEX-16NPV-2526-SM-6M483 50-59 years, female 49.2
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 49.1
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 48.9
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 48.9
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 48.8
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 48.6
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 48.6
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 48.6
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 48.5
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 48.2
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 47.9
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 47.8
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 47.7
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 47.3
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 47.3
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 47.1
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 46.9
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 46.9
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 46.9
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 46.6
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 46.5
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 46.4
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 46.4
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 46.2
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 46.2
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 46.0
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 45.7
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 45.6
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 45.4
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 45.4
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 45.2
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 45.2
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 44.8
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 44.5
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 44.5
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 44.4
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 44.1
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 44.1
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 43.4
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 43.4
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 43.3
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 42.9
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 42.4
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 42.3
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 42.2
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 42.0
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 41.8
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 41.6
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 41.5
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 41.2
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 39.2
GTEX-1C475-0526-SM-793AC 40-49 years, female 38.7
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 38.6
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 38.4
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 38.2
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 38.1
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 38.0
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 37.5
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 36.4
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 36.2
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 36.2
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 35.7
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 35.7
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 34.7
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 33.1
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 32.6
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 32.0
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 123.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 123.4
FF:10204-103F6 68 years, female 123.4

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