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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:133.7 nTPM
HPA:133.7 nTPM
GTEx:63.9 nTPM
FANTOM5:242.7 Scaled Tags Per Million
Pig:67.0 nTPM
Mouse:31.0 nTPM
Allen mouse:4.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA068898Antibody CAB003171
Glial cells HighHigh
Neuronal cells Not detectedNot detected




BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 133.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 62.8
2288 Male, age 75, left hemisphere 91.2
2846 Female, age 79, unknown 66.4
1781 Male, age 74, unknown 62.1
2290 Female, age 72, unknown 60.9
1854 Male, age 80, left hemisphere 58.3
2481 Female, age 94, left hemisphere 58.0
2289 Male, age 61, right hemisphere 56.3
1857 Female, age 85, left hemisphere 49.1
Claustrum
nTPM: 84.9
2292 Female, age 85, both hemispheres 136.5
1956 Male, age 74, unknown 112.8
2196 Female, age 79, unknown 85.5
2568 Male, age 61, both hemispheres 74.7
2392 Female, age 94, both hemispheres 74.6
2284 Female, age 91, both hemispheres 74.0
2198 Male, age 80, both hemispheres 72.8
2645 Female, age 72, unknown 67.2
2491 Male, age 75, both hemispheres 66.1
Globus pallidus, externus
nTPM: 122.7
1996 Male, age 80, right hemisphere 139.4
2646 Male, age 61, right hemisphere 139.4
2567 Female, age 72, unknown 133.6
2772 Female, age 79, unknown 110.6
2395 Male, age 75, both hemispheres 90.4
Globus pallidus, internus
nTPM: 133.7
2111 Female, age 85, right hemisphere 188.3
2566 Female, age 72, unknown 153.8
2778 Female, age 91, both hemispheres 147.2
2037 Male, age 80, right hemisphere 128.6
1818 Male, age 74, unknown 128.5
2287 Male, age 75, right hemisphere 118.6
2483 Female, age 94, right hemisphere 71.1
Nucleus accumbens
nTPM: 76.0
2391 Female, age 94, left hemisphere 106.2
2698 Female, age 72, unknown 100.3
2286 Male, age 75, left hemisphere 85.5
2732 Male, age 80, right hemisphere 84.9
1806 Female, age 85, left hemisphere 64.1
1783 Male, age 74, unknown 63.5
2824 Male, age 61, right hemisphere 60.4
1856 Female, age 91, right hemisphere 42.9
Nucleus basalis of Meynert
nTPM: 81.6
2569 Male, age 61, both hemispheres 122.2
2821 Male, age 75, both hemispheres 77.9
2484 Female, age 94, left hemisphere 63.6
2393 Male, age 80, right hemisphere 62.6
Nucleus of the diagonal band
nTPM: 42.7
1979 Male, age 74, unknown 48.0
1812 Female, age 91, both hemispheres 45.7
2029 Male, age 61, right hemisphere 43.1
2195 Female, age 85, both hemispheres 39.0
2775 Male, age 80, right hemisphere 37.8
Olfactory tubercle
nTPM: 47.1
2856 Male, age 75, right hemisphere 53.1
1998 Female, age 91, both hemispheres 47.2
2487 Female, age 94, left hemisphere 46.2
1846 Male, age 80, right hemisphere 41.8
Putamen
nTPM: 66.7
1829 Male, age 74, unknown 83.0
2482 Female, age 94, left hemisphere 75.6
2647 Male, age 75, left hemisphere 75.1
2489 Female, age 72, unknown 73.5
1937 Female, age 91, right hemisphere 62.6
2466 Female, age 79, unknown 54.1
1838 Male, age 80, right hemisphere 42.7
Septal nuclei
nTPM: 55.7
2394 Male, age 61, left hemisphere 95.4
2199 Male, age 80, right hemisphere 64.9
2059 Female, age 85, both hemispheres 55.7
2629 Female, age 94, right hemisphere 55.3
2009 Female, age 91, both hemispheres 42.0
2031 Female, age 72, unknown 39.9
1960 Male, age 74, unknown 37.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 63.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 49.2
Samples: 246

Max nTPM: 134.0
Min nTPM: 8.3
Std nTPM: 22.9
Median nTPM: 44.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 134.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 117.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 117.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 117.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 116.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 110.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 106.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 105.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 100.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 99.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 93.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 93.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 92.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 91.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 90.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 90.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 87.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 87.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 84.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 84.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 84.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 84.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 83.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 83.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 83.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 81.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 81.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 79.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 79.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 77.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 75.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 75.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 75.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 71.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 71.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 71.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 70.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 70.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 69.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 68.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 68.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 68.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 68.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 67.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 67.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 67.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 66.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 66.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 66.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 65.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 64.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 64.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 64.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 64.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 64.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 64.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 64.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 64.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 63.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 63.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 63.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 63.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 63.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 62.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 62.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 62.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 62.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 62.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 62.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 61.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 61.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 61.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 60.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 59.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 59.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 58.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 57.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 57.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 57.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 57.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 56.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 55.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 55.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 55.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 55.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 55.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 54.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 53.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 52.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 52.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 51.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 51.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 50.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 50.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 50.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 50.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 50.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 49.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 49.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 49.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 49.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 49.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 48.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 48.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 48.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 47.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 47.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 47.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 46.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 46.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 46.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 46.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 46.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 45.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 45.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 45.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 45.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 45.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 45.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 45.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 45.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 45.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 44.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 44.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 44.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 44.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 44.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 44.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 43.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 43.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 43.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 43.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 43.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 43.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 43.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 42.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 42.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 42.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 42.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 42.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 42.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 41.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 41.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 41.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 41.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 40.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 40.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 40.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 39.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 39.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 39.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 39.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 38.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 38.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 38.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 38.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 38.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 38.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 38.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 38.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 37.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 37.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 36.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 36.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 36.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 35.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 35.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 35.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 35.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 35.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 34.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 34.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 34.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 34.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 33.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 33.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 33.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 33.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 33.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 33.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 33.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 33.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 33.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 32.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 32.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 32.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 32.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 32.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 31.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 31.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 31.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 30.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 30.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 30.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 29.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 29.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 29.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 28.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 28.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 28.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 28.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 28.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 28.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 28.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 27.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 27.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 26.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 26.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 26.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 26.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 26.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 25.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 25.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 25.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 25.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 25.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 24.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 24.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 24.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 24.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 23.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 23.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 23.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 23.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 22.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 22.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 22.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 21.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 21.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 20.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 20.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 20.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 20.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 20.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 19.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 19.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 19.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 19.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 19.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 17.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 17.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 16.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 15.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 13.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 11.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 8.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 36.8
Samples: 246

Max nTPM: 133.7
Min nTPM: 10.4
Std nTPM: 19.7
Median nTPM: 31.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 133.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 125.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 115.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 99.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 91.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 90.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 89.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 85.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 80.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 80.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 78.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 76.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 75.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 75.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 74.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 73.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 73.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 69.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 66.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 65.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 65.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 63.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 62.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 61.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 60.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 60.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 60.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 60.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 59.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 58.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 58.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 58.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 58.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 58.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 57.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 57.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 55.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 53.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 53.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 53.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 52.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 51.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 51.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 49.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 49.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 48.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 48.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 48.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 48.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 48.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 47.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 47.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 47.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 47.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 46.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 46.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 46.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 46.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 46.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 45.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 45.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 45.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 44.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 44.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 43.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 43.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 43.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 42.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 42.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 41.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 41.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 41.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 41.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 40.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 40.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 40.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 40.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 39.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 39.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 39.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 39.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 39.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 38.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 38.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 38.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 38.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 37.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 37.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 37.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 37.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 36.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 36.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 36.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 36.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 36.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 35.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 35.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 35.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 35.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 35.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 35.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 34.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 34.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 34.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 33.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 33.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 33.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 33.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 33.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 33.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 33.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 33.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 32.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 32.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 32.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 32.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 32.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 32.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 31.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 31.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 31.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 31.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 31.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 31.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 31.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 31.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 30.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 30.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 30.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 30.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 30.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 30.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 30.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 29.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 29.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 29.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 29.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 29.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 29.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 29.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 29.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 29.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 29.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 28.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 28.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 28.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 28.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 28.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 28.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 28.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 27.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 27.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 27.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 27.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 27.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 27.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 26.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 26.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 26.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 26.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 26.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 26.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 26.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 26.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 26.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 25.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 25.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 25.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 25.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 25.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 25.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 25.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 25.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 25.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 25.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 24.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 24.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 24.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 24.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 24.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 24.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 24.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 24.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 24.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 24.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 24.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 23.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 23.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 23.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 23.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 23.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 23.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 22.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 22.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 22.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 22.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 22.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 22.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 22.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 22.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 21.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 21.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 20.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 20.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 20.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 20.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 20.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 20.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 20.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 19.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 19.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 19.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 19.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 18.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 18.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 18.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 18.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 18.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 18.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 18.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 18.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 18.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 17.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 17.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 17.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 17.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 17.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 17.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 16.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 16.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 16.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 15.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 15.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 15.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 15.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 15.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 15.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 14.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 14.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 14.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 12.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 11.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 11.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 10.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 10.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 10.4
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Brain - Putamen (basal ganglia)
Average nTPM: 63.9
Samples: 205

Max nTPM: 239.4
Min nTPM: 24.2
Std nTPM: 25.8
Median nTPM: 58.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 239.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 134.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 128.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 124.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 122.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 113.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 113.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 109.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 108.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 108.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 107.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 106.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 105.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 105.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 104.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 104.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 102.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 100.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 100.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 99.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 98.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 97.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 95.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 93.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 93.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 92.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 92.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 91.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 90.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 89.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 88.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 87.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 87.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 87.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 86.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 85.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 85.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 84.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 84.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 84.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 83.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 83.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 82.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 82.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 81.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 80.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 79.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 79.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 78.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 77.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 76.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 76.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 76.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 75.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 75.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 75.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 74.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 74.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 73.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 73.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 73.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 73.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 72.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 72.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 71.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 71.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 69.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 69.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 69.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 68.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 67.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 67.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 67.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 66.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 66.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 65.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 65.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 65.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 65.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 65.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 64.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 64.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 63.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 63.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 62.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 62.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 62.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 62.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 62.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 61.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 61.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 61.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 61.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 61.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 60.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 60.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 60.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 60.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 59.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 59.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 59.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 59.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 58.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 58.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 58.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 58.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 58.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 57.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 57.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 57.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 57.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 57.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 57.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 56.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 56.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 56.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 56.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 55.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 55.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 55.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 55.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 55.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 55.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 55.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 54.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 54.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 54.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 54.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 54.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 53.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 53.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 53.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 52.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 52.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 52.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 52.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 51.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 51.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 51.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 51.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 51.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 50.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 50.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 50.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 49.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 48.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 48.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 47.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 47.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 47.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 47.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 47.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 47.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 47.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 46.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 46.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 46.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 45.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 45.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 45.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 44.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 44.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 44.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 44.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 43.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 43.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 43.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 43.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 43.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 42.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 42.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 41.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 40.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 40.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 40.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 40.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 39.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 39.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 39.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 39.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 38.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 37.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 37.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 37.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 36.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 36.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 36.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 36.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 34.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 33.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 32.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 32.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 31.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 31.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 30.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 30.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 29.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 29.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 27.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 26.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 26.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 26.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 25.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 24.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 24.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 242.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 117.5
FF:10164-103B2 76 years, female 117.5
Globus pallidus
Scaled Tags Per Million: 242.7
FF:10161-103A8 76 years, female 378.8
FF:10175-103C4 60 years, female 106.5
Nucleus accumbens
Scaled Tags Per Million: 174.1
FF:10037-101F1 23-56 years, mixed 174.1
Putamen
Scaled Tags Per Million: 98.5
FF:10176-103C5 60 years, female 98.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 67.0
Pig sample Sample description nTPM
Caudate
nTPM: 27.4
Samples: 4

Max nTPM: 30.5
Min nTPM: 24.9
Sample A Female 30.5
Sample B Female 26.2
Sample C Male 28.1
Sample D Male 24.9
Putamen
nTPM: 67.0
Samples: 4

Max nTPM: 117.0
Min nTPM: 31.8
Sample A Female 117.0
Sample B Female 31.8
Sample C Male 41.3
Sample D Male 77.8
Septum
nTPM: 47.2
Samples: 4

Max nTPM: 54.8
Min nTPM: 33.9
Sample A Female 54.0
Sample B Female 33.9
Sample C Male 45.9
Sample D Male 54.8
Ventral pallidum
nTPM: 63.1
Samples: 4

Max nTPM: 90.7
Min nTPM: 31.8
Sample A Female 31.8
Sample B Female 46.2
Sample C Male 90.7
Sample D Male 83.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 31.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 31.0
Samples: 4

Max nTPM: 40.3
Min nTPM: 25.8
Sample A Male 31.5
Sample B Male 40.3
Sample C Female 26.5
Sample D Female 25.8
Septum
nTPM: 29.0
Samples: 4

Max nTPM: 35.5
Min nTPM: 25.3
Sample A Male 25.3
Sample B Male 25.6
Sample C Female 29.6
Sample D Female 35.5
Ventral forebrain
nTPM: 21.8
Samples: 4

Max nTPM: 25.0
Min nTPM: 19.7
Sample A Male 25.0
Sample B Male 20.6
Sample C Female 21.8
Sample D Female 19.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 4.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.8
75694718 Antisense, RP_060518_03_H03, Mouse strain C57BL/6J (56 days, male) 3.9
79556652 Antisense, RP_071204_01_A09, Mouse strain C57BL/6J (56 days, male) 3.6
Pallidum
Expression energy: 4.5
79556652 Antisense, RP_071204_01_A09, Mouse strain C57BL/6J (56 days, male) 4.6
75694718 Antisense, RP_060518_03_H03, Mouse strain C57BL/6J (56 days, male) 4.4

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