LMF2

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:10.2 FPKM
GTEx:33.3 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA062626

 

Endothelial cells

Low  

Glandular cells

Medium  

Peripheral nerve/ganglion

Medium  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

10.2

overview Male, age 54
Sample 1
FPKM: 16.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 10.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 10.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 10.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 14.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 5.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 2.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

33.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 32.7
Samples: 149

Max RPKM: 56.3
Min RPKM: 18.3
Std RPKM: 7.6
Median RPKM: 32
GTEX-14E6C-2226-SM-5QGQG 56.3
GTEX-11DXY-2026-SM-5N9CZ 53.1
GTEX-13OW6-2226-SM-5N9FL 51.8
GTEX-13OVJ-1826-SM-5KM2D 48.3
GTEX-139TS-2226-SM-5J2N1 47.8
GTEX-13X6K-2726-SM-5O9DG 47.7
GTEX-147GR-2826-SM-5RQK8 47.7
GTEX-13FHO-2726-SM-5K7VG 45.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 34.0
Samples: 196

Max RPKM: 55
Min RPKM: 17.5
Std RPKM: 6.2
Median RPKM: 33.5
GTEX-147JS-2526-SM-5S2Q8 55.0
GTEX-ZAB4-2226-SM-5HL97 54.2
GTEX-13OVI-2026-SM-5J1MU 53.1
GTEX-13O3O-2526-SM-5L3DR 51.1
GTEX-13OVJ-1726-SM-5IJDZ 49.2
GTEX-SNOS-1226-SM-4DM5H 47.6
GTEX-UJHI-1126-SM-4IHLN 47.4
GTEX-11TTK-2426-SM-5PNYO 45.5
Show all