CDS2

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:8.8 FPKM
GTEx:7.2 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Low
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA019698

 

Endothelial cells

Medium  

Glandular cells

Low  

Peripheral nerve/ganglion

High  
 
 
 

COLON - HPA RNA-seq

? »

Average FPKM

8.8

overview Male, age 54
Sample 1
FPKM: 7.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 8.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 8.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 7.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 9.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 10.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 10.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

7.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 8.0
Samples: 149

Max RPKM: 11.7
Min RPKM: 3.4
Std RPKM: 1.3
Median RPKM: 8
GTEX-YEC3-2026-SM-4WWFL 11.7
GTEX-WYVS-1126-SM-4SOJX 11.4
GTEX-11WQK-2526-SM-5CVL8 11.3
GTEX-12WSG-2426-SM-5EQLZ 11.0
GTEX-11DXX-1926-SM-5EGJK 10.9
GTEX-13VXT-2026-SM-5L3EW 10.8
GTEX-ZPU1-1726-SM-4WWFV 10.7
GTEX-145ME-1126-SM-5SIAT 10.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 6.3
Samples: 196

Max RPKM: 12.8
Min RPKM: 2.5
Std RPKM: 1.8
Median RPKM: 5.9
GTEX-S341-1426-SM-4AD6U 12.8
GTEX-14AS3-1126-SM-5Q5CR 11.8
GTEX-13VXT-2426-SM-5LU46 10.5
GTEX-11ONC-2026-SM-5HL61 10.1
GTEX-111YS-1626-SM-5GZZ9 10.1
GTEX-U3ZH-1326-SM-4DXSF 10.1
GTEX-X5EB-0926-SM-46MVT 10.0
GTEX-V955-1626-SM-4JBHJ 10.0
Show all