We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
2635.9
nTPM
HPA Brain:
2759.7
nTPM
GTEx:
2635.9
nTPM
FANTOM5:
1369.3
Scaled Tags Per Million
Pig:
2197.7
nTPM
Mouse:
1312.2
nTPM
Allen mouse:
24.7
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
2759.7
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 1919.8
2828
Female, age 72, unknown
3091.1
2586
Male, age 75, left hemisphere
3020.4
2019
Male, age 18, unknown
1974.9
1833
Male, age 53, unknown
1820.4
2219
Male, age 76, both hemispheres
1778.4
1827
Male, age 72, unknown
1725.0
1830
Male, age 51, unknown
1517.1
2666
Male, age 74, left hemisphere
1490.2
1870
Female, age 42, unknown
1486.2
2411
Female, age 72, unknown
1294.5
Dorsal raphe nucleus nTPM: 2141.3
2016
Female, age 72, unknown
2534.1
2298
Female, age 72, unknown
2374.9
1828
Male, age 53, unknown
2127.2
2047
Male, age 72, unknown
2096.5
2750
Male, age 76, both hemispheres
1573.8
Inferior colliculus nTPM: 2522.7
1848
Female, age 42, unknown
3130.6
2849
Male, age 72, unknown
2763.9
1890
Male, age 53, unknown
2175.7
2097
Female, age 72, unknown
2020.7
Median raphe nucleus nTPM: 1971.4
2220
Male, age 76, midline
1971.4
Periaquaductal grey, anterior nTPM: 2535.1
1795
Male, age 51, unknown
2655.9
2502
Female, age 75, unknown
2587.1
1947
Male, age 18, unknown
2362.3
Periaquaductal grey, dorsal nTPM: 2759.7
2850
Male, age 76, both hemispheres
3466.4
1840
Male, age 53, unknown
3205.8
2464
Female, age 72, unknown
2349.5
1831
Male, age 72, unknown
2017.2
Periaquaductal grey, lateral nTPM: 2579.7
2140
Male, age 76, both hemispheres
3256.8
2053
Male, age 18, unknown
2321.2
2272
Male, age 74, both hemispheres
2161.0
Pretectal area nTPM: 2503.8
1817
Female, age 42, unknown
3399.8
2273
Male, age 74, both hemispheres
3399.5
1815
Male, age 53, unknown
2659.0
2667
Female, age 75, unknown
2631.1
2007
Male, age 72, unknown
2424.5
2407
Male, age 75, both hemispheres
2340.3
2224
Female, age 72, unknown
2217.0
1816
Male, age 51, unknown
2176.6
1944
Female, age 72, unknown
2126.1
2825
Male, age 18, unknown
2098.2
2316
Male, age 76, right hemisphere
2069.6
Red nucleus nTPM: 2536.4
2503
Female, age 72, unknown
3406.7
2227
Male, age 72, unknown
3051.7
2769
Male, age 72, unknown
3039.6
1904
Male, age 53, unknown
2939.8
1954
Female, age 42, unknown
2902.6
1865
Male, age 51, unknown
2795.0
1821
Female, age 72, unknown
2737.7
2588
Male, age 74, left hemisphere
2338.0
2785
Male, age 18, unknown
2259.0
2823
Male, age 76, right hemisphere
1912.0
2725
Female, age 75, unknown
1791.3
2584
Male, age 75, left hemisphere
1263.8
Substantia nigra nTPM: 1833.0
2699
Male, age 18, unknown
2585.6
2583
Male, age 75, right hemisphere
2298.0
1889
Female, age 72, unknown
2211.6
1916
Female, age 42, unknown
2133.9
1851
Male, age 51, unknown
1893.5
2665
Male, age 74, both hemispheres
1706.5
2590
Female, age 75, unknown
1671.2
1941
Male, age 53, unknown
1373.3
2241
Male, age 72, unknown
1297.8
2409
Female, age 72, unknown
1158.7
Superior colliculus nTPM: 2279.6
2664
Male, age 75, both hemispheres
3028.7
2668
Female, age 75, unknown
2981.6
1995
Male, age 72, unknown
2603.5
1796
Male, age 53, unknown
2273.4
2087
Female, age 72, unknown
2260.2
1839
Male, age 51, unknown
2172.2
2261
Male, age 18, unknown
2139.0
2587
Male, age 74, left hemisphere
1952.8
1913
Female, age 42, unknown
1850.6
1895
Male, age 76, right hemisphere
1533.5
Ventral tegmental area nTPM: 1781.1
1942
Male, age 51, unknown
1968.9
2218
Male, age 76, both hemispheres
1869.0
1915
Female, age 42, unknown
1841.8
2410
Female, age 72, unknown
1820.4
2021
Male, age 53, unknown
1682.4
2223
Female, age 72, unknown
1503.8
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
2635.9
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 2635.9
Samples: 139
Max nTPM: 8812.6
Min nTPM: 376.6
Std nTPM: 1578.2
Median nTPM: 2282.1
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
8812.6
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
8254.0
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
7440.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
7329.7
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
6889.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
6810.9
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
6000.5
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
5728.6
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
5474.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
5287.1
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
5257.2
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
4859.4
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
4755.0
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
4669.6
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
4656.1
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
4514.5
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
4443.6
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
4200.7
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
4085.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
4085.1
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
3960.3
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
3903.7
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
3893.7
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
3881.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
3755.7
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
3622.5
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
3560.4
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
3524.0
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
3516.6
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
3464.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
3445.6
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
3436.9
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
3411.4
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
3402.0
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
3337.6
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
3305.9
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
3209.2
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
3130.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
3101.6
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
3060.6
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
2986.1
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
2980.7
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
2971.6
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
2848.6
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
2824.9
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
2816.6
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
2813.9
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
2810.1
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
2807.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
2717.1
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
2706.0
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
2665.0
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
2657.3
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
2631.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
2626.9
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
2611.6
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
2575.8
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
2516.3
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
2404.6
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
2376.1
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
2375.7
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
2369.8
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
2361.2
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
2351.6
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
2349.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
2345.0
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
2341.8
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
2316.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
2284.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
2282.1
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
2273.4
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
2229.8
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
2216.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
2188.4
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
2162.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
2141.9
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
2129.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
2127.9
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
2118.7
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
2102.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
2089.6
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
2089.4
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
2087.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
2080.2
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
2061.1
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
2005.2
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
2000.0
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
1992.9
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
1991.6
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
1963.1
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
1943.8
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
1892.9
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
1876.6
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
1813.3
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
1796.9
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
1770.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
1768.2
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
1725.1
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
1723.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
1679.6
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
1669.5
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
1663.8
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
1655.0
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
1636.1
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
1633.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
1628.2
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
1616.2
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
1610.4
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
1571.0
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
1564.5
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
1555.4
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
1525.0
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
1374.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
1350.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
1344.8
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
1340.8
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
1326.6
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
1302.2
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
1293.5
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
1288.8
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
1259.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
1050.4
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
1017.5
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
967.7
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
921.6
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
919.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
885.4
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
882.1
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
836.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
803.0
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
787.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
771.3
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
745.3
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
641.8
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
641.1
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
600.6
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
546.0
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
537.4
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
376.6
Show allShow less
MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
1312.2
Mouse sample
Sample description
nTPM
Midbrain nTPM: 1312.2
Samples: 4
Max nTPM: 1511.2
Min nTPM: 1113.6
Sample A
Male
1511.2
Sample B
Male
1219.5
Sample C
Female
1113.6
Sample D
Female
1404.4
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.