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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
307.0
nTPM
HPA Brain:
134.6
nTPM
GTEx:
307.0
nTPM
FANTOM5:
74.7
Scaled Tags Per Million
Pig:
64.6
nTPM
Mouse:
115.8
nTPM
Allen mouse:
0.0
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
134.6
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 130.7
2586
Male, age 75, left hemisphere
178.3
2666
Male, age 74, left hemisphere
142.7
1830
Male, age 51, unknown
136.4
2019
Male, age 18, unknown
135.1
2828
Female, age 72, unknown
134.5
1833
Male, age 53, unknown
120.3
2411
Female, age 72, unknown
119.1
1827
Male, age 72, unknown
116.9
1870
Female, age 42, unknown
116.5
2219
Male, age 76, both hemispheres
107.4
Dorsal raphe nucleus nTPM: 119.0
2750
Male, age 76, both hemispheres
121.7
1828
Male, age 53, unknown
121.5
2047
Male, age 72, unknown
121.1
2016
Female, age 72, unknown
118.3
2298
Female, age 72, unknown
112.2
Inferior colliculus nTPM: 110.3
2849
Male, age 72, unknown
118.5
1890
Male, age 53, unknown
114.4
1848
Female, age 42, unknown
108.5
2097
Female, age 72, unknown
99.8
Median raphe nucleus nTPM: 110.8
2220
Male, age 76, midline
110.8
Periaquaductal grey, anterior nTPM: 120.6
2502
Female, age 75, unknown
124.0
1795
Male, age 51, unknown
119.8
1947
Male, age 18, unknown
118.0
Periaquaductal grey, dorsal nTPM: 111.5
2850
Male, age 76, both hemispheres
114.4
2464
Female, age 72, unknown
113.5
1831
Male, age 72, unknown
111.7
1840
Male, age 53, unknown
106.5
Periaquaductal grey, lateral nTPM: 117.9
2140
Male, age 76, both hemispheres
130.3
2272
Male, age 74, both hemispheres
111.8
2053
Male, age 18, unknown
111.6
Pretectal area nTPM: 116.6
2316
Male, age 76, right hemisphere
132.3
2407
Male, age 75, both hemispheres
130.3
2007
Male, age 72, unknown
124.0
1815
Male, age 53, unknown
121.0
1817
Female, age 42, unknown
116.9
2667
Female, age 75, unknown
112.4
2825
Male, age 18, unknown
112.3
1944
Female, age 72, unknown
109.0
1816
Male, age 51, unknown
108.3
2224
Female, age 72, unknown
108.0
2273
Male, age 74, both hemispheres
107.9
Red nucleus nTPM: 134.6
2584
Male, age 75, left hemisphere
162.4
2588
Male, age 74, left hemisphere
147.5
2785
Male, age 18, unknown
145.7
2769
Male, age 72, unknown
141.2
1865
Male, age 51, unknown
138.9
2503
Female, age 72, unknown
136.3
2227
Male, age 72, unknown
135.5
1904
Male, age 53, unknown
132.5
2725
Female, age 75, unknown
127.7
2823
Male, age 76, right hemisphere
118.9
1954
Female, age 42, unknown
115.5
1821
Female, age 72, unknown
113.0
Substantia nigra nTPM: 117.1
2665
Male, age 74, both hemispheres
130.9
2583
Male, age 75, right hemisphere
130.5
2699
Male, age 18, unknown
127.6
2590
Female, age 75, unknown
124.5
2409
Female, age 72, unknown
121.2
1851
Male, age 51, unknown
118.3
1941
Male, age 53, unknown
115.1
1889
Female, age 72, unknown
109.3
1916
Female, age 42, unknown
101.6
2241
Male, age 72, unknown
91.6
Superior colliculus nTPM: 124.5
2664
Male, age 75, both hemispheres
148.1
1913
Female, age 42, unknown
142.4
1995
Male, age 72, unknown
139.4
2587
Male, age 74, left hemisphere
122.9
2668
Female, age 75, unknown
122.1
1839
Male, age 51, unknown
117.8
1796
Male, age 53, unknown
116.3
2087
Female, age 72, unknown
115.1
2261
Male, age 18, unknown
110.9
1895
Male, age 76, right hemisphere
110.2
Ventral tegmental area nTPM: 116.2
2021
Male, age 53, unknown
128.9
2223
Female, age 72, unknown
119.3
1942
Male, age 51, unknown
118.5
2410
Female, age 72, unknown
113.7
2218
Male, age 76, both hemispheres
109.4
1915
Female, age 42, unknown
107.6
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
307.0
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 307.0
Samples: 139
Max nTPM: 979.7
Min nTPM: 112.8
Std nTPM: 114.4
Median nTPM: 291.7
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
979.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
661.1
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
609.6
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
533.6
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
502.3
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
493.9
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
483.5
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
481.0
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
475.0
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
472.2
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
470.1
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
467.9
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
459.4
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
456.3
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
455.6
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
445.5
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
444.6
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
444.0
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
440.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
438.5
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
424.9
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
406.6
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
400.4
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
396.8
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
384.5
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
381.2
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
378.2
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
374.9
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
374.2
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
372.8
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
371.6
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
367.9
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
366.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
362.9
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
356.3
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
355.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
354.1
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
351.9
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
345.8
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
345.5
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
338.8
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
338.6
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
334.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
334.1
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
329.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
328.3
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
327.9
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
326.5
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
323.9
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
323.7
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
322.6
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
321.2
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
319.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
317.2
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
316.5
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
315.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
314.7
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
313.8
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
312.8
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
309.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
306.8
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
306.4
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
305.5
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
303.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
302.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
302.3
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
300.5
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
298.3
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
293.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
291.7
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
289.5
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
286.6
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
286.5
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
284.7
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
284.1
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
282.3
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
278.8
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
277.0
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
275.4
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
274.8
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
274.7
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
273.9
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
270.7
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
268.9
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
268.8
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
268.8
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
264.1
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
262.1
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
260.0
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
256.2
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
255.9
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
254.7
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
253.4
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
252.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
245.9
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
245.0
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
240.1
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
239.4
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
239.2
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
233.4
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
232.1
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
226.0
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
225.4
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
222.1
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
220.2
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
219.7
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
218.5
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
216.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
216.0
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
214.8
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
214.5
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
212.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
210.4
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
210.3
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
205.0
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
204.9
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
203.8
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
201.9
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
198.6
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
198.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
197.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
196.7
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
195.7
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
192.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
192.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
191.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
189.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
185.6
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
185.3
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
182.8
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
182.8
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
181.9
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
180.1
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
171.6
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
159.9
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
140.2
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
123.8
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
123.6
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
112.8
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
115.8
Mouse sample
Sample description
nTPM
Midbrain nTPM: 115.8
Samples: 4
Max nTPM: 122.4
Min nTPM: 110.6
Sample A
Male
122.4
Sample B
Male
110.6
Sample C
Female
113.4
Sample D
Female
116.7
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.