CCDC6

SOFT TISSUE - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:8.7 FPKM
GTEx:9.0 RPKM

SOFT TISSUE 1 - Immunohistochemistry

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Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not available
Fibroblasts:Not detected
Peripheral nerve:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA019049

 

Antibody HPA019051

 

Adipocytes

Not detected   Not detected  

Chondrocytes

Not available   Not available  

Fibroblasts

Not detected   Low  

Peripheral nerve

Not detected   Not detected  
   
   
   

SOFT TISSUE 2 - Immunohistochemistry

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Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not available
Fibroblasts:Not detected
Peripheral nerve:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA019049

 

Antibody HPA019051

 

Adipocytes

Not detected   Not detected  

Chondrocytes

Not available   Not available  

Fibroblasts

Not detected   Low  

Peripheral nerve

Not detected   Not detected  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

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Average FPKM

8.7

N/A Female, age 80
Sample 1
FPKM: 7.2
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
FPKM: 7.2
N/A Female, age 57
Sample 3
FPKM: 7.0
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
FPKM: 12.7
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
FPKM: 9.4
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

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Average RPKM

9.0

GTEx sample id

RPKM

 

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 9.5
Samples: 350

Max RPKM: 19
Min RPKM: 4.6
Std RPKM: 2.1
Median RPKM: 9.3
GTEX-R55F-1426-SM-2TF53 19.0
GTEX-POYW-0726-SM-2XCEO 18.3
GTEX-139D8-0326-SM-5IJCJ 17.5
GTEX-S4Z8-1726-SM-3K2AX 16.3
GTEX-UTHO-0426-SM-5SI7N 15.8
GTEX-145MI-0426-SM-5O99V 15.4
GTEX-NFK9-0326-SM-3MJGV 15.1
GTEX-ZE7O-0226-SM-5S2N1 15.0
Show all
 

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 8.5
Samples: 227

Max RPKM: 16.7
Min RPKM: 4.1
Std RPKM: 2.7
Median RPKM: 8.2
GTEX-13W46-1226-SM-5SIAS 16.7
GTEX-147JS-1026-SM-5S2MP 15.9
GTEX-X8HC-2326-SM-4QAS4 15.9
GTEX-139TU-1426-SM-5LZY9 14.9
GTEX-13PL6-0926-SM-5KLYY 14.6
GTEX-11NV4-1426-SM-5BC4W 14.6
GTEX-113JC-0726-SM-5GZZR 14.1
GTEX-XLM4-1026-SM-4AT51 14.1
Show all