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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
4936.9
nTPM
Monaco:
1844.1
nTPM
Schmiedel:
2960.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
4936.9
HPA sample
nTPM
gdT-cell nTPM: 2493.1
Samples: 6
Max nTPM: 3091.7
Min nTPM: 1850.9
P10809_1007
2812.2
P10809_1022
2571.6
P10809_1041
3091.7
P10809_1060
1850.9
P10809_1077
2159.8
P10809_1098
2472.5
MAIT T-cell nTPM: 3870.6
Samples: 6
Max nTPM: 4573.8
Min nTPM: 2947.1
P10809_1006
3757.2
P10809_1024
4199.8
P10809_1043
4162.2
P10809_1062
3583.4
P10809_1083
2947.1
P10809_1097
4573.8
Memory CD4 T-cell nTPM: 3996.7
Samples: 6
Max nTPM: 5008.2
Min nTPM: 2848.8
P10809_1014
4400.2
P10809_1026
5008.2
P10809_1045
4706.0
P10809_1064
3012.0
P10809_1086
2848.8
P10809_1113
4005.0
Memory CD8 T-cell nTPM: 3159.4
Samples: 5
Max nTPM: 3669.0
Min nTPM: 2503.6
P10809_1012
3537.4
P10809_1027
3076.5
P10809_1046
3669.0
P10809_1065
2503.6
P10809_1111
3010.7
Naive CD4 T-cell nTPM: 4936.9
Samples: 6
Max nTPM: 5741.1
Min nTPM: 3932.1
P10809_1015
5367.5
P10809_1030
5361.5
P10809_1049
5741.1
P10809_1068
4595.7
P10809_1085
3932.1
P10809_1112
4623.6
Naive CD8 T-cell nTPM: 4100.5
Samples: 6
Max nTPM: 5983.6
Min nTPM: 2194.5
P10809_1016
5983.6
P10809_1031
4767.5
P10809_1050
3949.9
P10809_1069
3459.2
P10809_1087
2194.5
P10809_1110
4248.2
T-reg nTPM: 3467.2
Samples: 6
Max nTPM: 4209.8
Min nTPM: 2946.3
P10809_1018
2946.3
P10809_1037
3221.5
P10809_1056
4209.8
P10809_1075
3186.4
P10809_1094
3755.0
P10809_1106
3484.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1844.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1255.8
Samples: 4
Max nTPM: 1541.5
Min nTPM: 728.0
RHH5202_R3573
728.0
RHH5230_R3602
1373.2
RHH5259_R3631
1380.3
RHH5288_R3660
1541.5
Effector memory CD8 T-cell nTPM: 482.3
Samples: 4
Max nTPM: 678.2
Min nTPM: 317.5
RHH5203_R3574
480.4
RHH5231_R3603
452.9
RHH5260_R3632
678.2
RHH5289_R3661
317.5
MAIT T-cell nTPM: 1127.7
Samples: 4
Max nTPM: 1549.7
Min nTPM: 868.4
RHH5233_R3605
868.4
RHH5205_R3576
947.1
RHH5262_R3634
1145.4
RHH5297_R3663
1549.7
Memory CD4 T-cell TFH nTPM: 1209.7
Samples: 4
Max nTPM: 1504.3
Min nTPM: 881.6
RHH5300_R3666
1504.3
RHH5236_R3608
1454.5
RHH5265_R3637
998.5
RHH5208_R3579
881.6
Memory CD4 T-cell Th1 nTPM: 1688.1
Samples: 4
Max nTPM: 2555.4
Min nTPM: 831.2
RHH5210_R3581
831.2
RHH5302_R3668
2555.4
RHH5238_R3610
2019.5
RHH5267_R3639
1346.4
Memory CD4 T-cell Th1/Th17 nTPM: 1290.2
Samples: 4
Max nTPM: 1496.5
Min nTPM: 901.6
RHH5303_R3669
1496.5
RHH5211_R3582
901.6
RHH5239_R3611
1303.7
RHH5268_R3640
1459.1
Memory CD4 T-cell Th17 nTPM: 1176.4
Samples: 4
Max nTPM: 1569.9
Min nTPM: 995.5
RHH5304_R3670
1569.9
RHH5212_R3583
1028.7
RHH5240_R3612
995.5
RHH5269_R3641
1111.3
Memory CD4 T-cell Th2 nTPM: 1431.7
Samples: 4
Max nTPM: 2007.9
Min nTPM: 1039.8
RHH5305_R3671
2007.9
RHH5213_R3584
1039.8
RHH5241_R3613
1525.8
RHH5270_R3642
1153.3
Naive CD4 T-cell nTPM: 1844.1
Samples: 4
Max nTPM: 2407.0
Min nTPM: 1420.8
RHH5306_R3672
2407.0
RHH5214_R3585
2041.4
RHH5242_R3614
1420.8
RHH5271_R3643
1507.2
Naive CD8 T-cell nTPM: 1529.6
Samples: 4
Max nTPM: 1880.5
Min nTPM: 971.9
RHH5201_R3572
971.9
RHH5229_R3601
1746.3
RHH5258_R3630
1519.6
RHH5287_R3659
1880.5
Non-Vd2 gdTCR nTPM: 810.2
Samples: 4
Max nTPM: 1167.2
Min nTPM: 566.5
RHH5235_R3607
867.0
RHH5264_R3636
640.0
RHH5207_R3578
566.5
RHH5299_R3665
1167.2
T-reg nTPM: 1349.3
Samples: 4
Max nTPM: 2119.0
Min nTPM: 945.2
RHH5301_R3667
2119.0
RHH5237_R3609
945.2
RHH5266_R3638
1204.4
RHH5209_R3580
1128.6
Terminal effector memory CD4 T-cell nTPM: 719.1
Samples: 2
Max nTPM: 724.4
Min nTPM: 713.8
RHH5243_R3615
713.8
RHH5272_R3644
724.4
Terminal effector memory CD8 T-cell nTPM: 998.7
Samples: 4
Max nTPM: 1827.9
Min nTPM: 482.2
RHH5232_R3604
482.2
RHH5204_R3575
1827.9
RHH5261_R3633
864.1
RHH5296_R3662
820.5
Vd2 gdTCR nTPM: 1487.5
Samples: 4
Max nTPM: 2194.5
Min nTPM: 996.2
RHH5234_R3606
996.2
RHH5206_R3577
1746.8
RHH5263_R3635
1012.5
RHH5298_R3664
2194.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.