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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
68.5
nTPM
HPA Brain:
149.5
nTPM
GTEx:
68.5
nTPM
FANTOM5:
143.8
Scaled Tags Per Million
Pig:
35.8
nTPM
Mouse:
19.8
nTPM
Allen mouse:
0.1
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
149.5
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 119.4
2411
Female, age 72, unknown
162.0
1870
Female, age 42, unknown
161.3
1833
Male, age 53, unknown
147.7
1830
Male, age 51, unknown
142.1
2019
Male, age 18, unknown
129.2
2828
Female, age 72, unknown
113.6
1827
Male, age 72, unknown
92.4
2219
Male, age 76, both hemispheres
84.8
2666
Male, age 74, left hemisphere
83.7
2586
Male, age 75, left hemisphere
76.8
Dorsal raphe nucleus nTPM: 130.0
2750
Male, age 76, both hemispheres
182.9
1828
Male, age 53, unknown
150.8
2016
Female, age 72, unknown
109.8
2298
Female, age 72, unknown
106.3
2047
Male, age 72, unknown
100.2
Inferior colliculus nTPM: 88.6
1890
Male, age 53, unknown
96.6
1848
Female, age 42, unknown
95.5
2097
Female, age 72, unknown
89.9
2849
Male, age 72, unknown
72.3
Median raphe nucleus nTPM: 129.2
2220
Male, age 76, midline
129.2
Periaquaductal grey, anterior nTPM: 92.9
2502
Female, age 75, unknown
121.0
1795
Male, age 51, unknown
88.3
1947
Male, age 18, unknown
69.6
Periaquaductal grey, dorsal nTPM: 89.6
1831
Male, age 72, unknown
99.6
2464
Female, age 72, unknown
95.6
2850
Male, age 76, both hemispheres
93.3
1840
Male, age 53, unknown
69.7
Periaquaductal grey, lateral nTPM: 110.8
2272
Male, age 74, both hemispheres
131.8
2053
Male, age 18, unknown
103.9
2140
Male, age 76, both hemispheres
96.5
Pretectal area nTPM: 91.3
2273
Male, age 74, both hemispheres
119.8
2224
Female, age 72, unknown
117.2
2825
Male, age 18, unknown
103.7
2316
Male, age 76, right hemisphere
103.5
2667
Female, age 75, unknown
99.8
1815
Male, age 53, unknown
90.4
2007
Male, age 72, unknown
82.6
1817
Female, age 42, unknown
82.5
2407
Male, age 75, both hemispheres
75.4
1944
Female, age 72, unknown
71.1
1816
Male, age 51, unknown
58.3
Red nucleus nTPM: 149.5
2823
Male, age 76, right hemisphere
179.4
1821
Female, age 72, unknown
169.0
2769
Male, age 72, unknown
169.0
1865
Male, age 51, unknown
167.2
1904
Male, age 53, unknown
165.4
2227
Male, age 72, unknown
165.3
1954
Female, age 42, unknown
151.7
2503
Female, age 72, unknown
145.0
2785
Male, age 18, unknown
132.1
2588
Male, age 74, left hemisphere
125.8
2725
Female, age 75, unknown
122.2
2584
Male, age 75, left hemisphere
102.3
Substantia nigra nTPM: 112.6
2699
Male, age 18, unknown
162.6
1851
Male, age 51, unknown
139.7
1916
Female, age 42, unknown
138.2
2241
Male, age 72, unknown
124.8
2409
Female, age 72, unknown
115.2
1889
Female, age 72, unknown
103.4
2590
Female, age 75, unknown
103.2
2583
Male, age 75, right hemisphere
90.0
1941
Male, age 53, unknown
88.4
2665
Male, age 74, both hemispheres
60.6
Superior colliculus nTPM: 95.7
1913
Female, age 42, unknown
131.1
2587
Male, age 74, left hemisphere
119.6
1995
Male, age 72, unknown
116.4
1895
Male, age 76, right hemisphere
108.4
1839
Male, age 51, unknown
101.6
1796
Male, age 53, unknown
91.3
2668
Female, age 75, unknown
79.6
2087
Female, age 72, unknown
78.0
2261
Male, age 18, unknown
73.2
2664
Male, age 75, both hemispheres
58.2
Ventral tegmental area nTPM: 146.5
2223
Female, age 72, unknown
176.3
2218
Male, age 76, both hemispheres
165.7
2410
Female, age 72, unknown
163.1
1915
Female, age 42, unknown
137.0
2021
Male, age 53, unknown
121.1
1942
Male, age 51, unknown
115.7
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
68.5
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 68.5
Samples: 139
Max nTPM: 239.1
Min nTPM: 19.9
Std nTPM: 29.5
Median nTPM: 61.4
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
239.1
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
193.2
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
154.4
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
147.3
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
137.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
133.8
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
123.6
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
119.5
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
113.5
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
110.8
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
101.3
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
101.1
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
100.7
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
99.8
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
99.2
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
98.8
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
98.3
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
95.0
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
93.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
91.2
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
89.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
89.2
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
88.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
87.0
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
86.4
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
85.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
85.3
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
83.2
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
81.4
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
80.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
79.3
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
79.3
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
78.4
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
78.2
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
77.7
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
76.7
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
76.6
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
76.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
75.5
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
75.0
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
74.7
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
73.9
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
73.7
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
73.6
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
73.1
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
73.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
72.9
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
72.2
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
71.8
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
71.5
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
71.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
70.4
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
69.8
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
69.5
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
69.4
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
69.3
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
68.1
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
67.8
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
67.2
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
66.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
65.9
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
64.4
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
63.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
62.6
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
62.3
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
62.2
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
61.8
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
61.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
61.7
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
61.4
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
61.3
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
61.1
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
61.0
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
60.7
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
60.7
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
60.6
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
60.5
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
59.6
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
59.5
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
59.0
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
58.9
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
58.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
57.3
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
57.1
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
56.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
56.0
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
55.9
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
55.7
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
55.6
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
55.5
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
55.5
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
55.4
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
55.3
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
54.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
54.5
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
54.2
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
53.7
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
53.7
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
53.3
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
53.0
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
52.2
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
51.5
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
51.3
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
51.2
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
51.1
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
49.8
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
49.7
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
49.4
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
49.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
48.0
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
47.6
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
47.1
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
46.8
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
46.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
46.7
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
46.2
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
45.6
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
45.3
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
44.8
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
44.4
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
43.2
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
43.2
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
43.1
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
43.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
42.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
42.3
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
41.4
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
40.9
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
39.8
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
39.5
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
39.4
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
37.3
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
37.1
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
37.0
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
36.3
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
36.1
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
31.3
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
23.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
19.9
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
19.8
Mouse sample
Sample description
nTPM
Midbrain nTPM: 19.8
Samples: 4
Max nTPM: 23.4
Min nTPM: 16.8
Sample A
Male
23.4
Sample B
Male
21.1
Sample C
Female
17.9
Sample D
Female
16.8
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.