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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
63.2
nTPM
HPA Brain:
79.4
nTPM
GTEx:
63.2
nTPM
FANTOM5:
39.1
Scaled Tags Per Million
Pig:
84.4
nTPM
Mouse:
26.2
nTPM
Allen mouse:
7.3
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
79.4
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 73.5
2586
Male, age 75, left hemisphere
103.5
2828
Female, age 72, unknown
98.1
1870
Female, age 42, unknown
76.3
2411
Female, age 72, unknown
69.0
1830
Male, age 51, unknown
68.1
1827
Male, age 72, unknown
66.6
1833
Male, age 53, unknown
66.6
2666
Male, age 74, left hemisphere
62.7
2019
Male, age 18, unknown
62.3
2219
Male, age 76, both hemispheres
61.8
Dorsal raphe nucleus nTPM: 69.5
2750
Male, age 76, both hemispheres
77.5
2016
Female, age 72, unknown
73.0
1828
Male, age 53, unknown
69.8
2047
Male, age 72, unknown
64.0
2298
Female, age 72, unknown
63.1
Inferior colliculus nTPM: 60.6
2849
Male, age 72, unknown
67.2
1848
Female, age 42, unknown
65.8
1890
Male, age 53, unknown
57.3
2097
Female, age 72, unknown
52.1
Median raphe nucleus nTPM: 68.7
2220
Male, age 76, midline
68.7
Periaquaductal grey, anterior nTPM: 73.3
2502
Female, age 75, unknown
75.6
1795
Male, age 51, unknown
75.2
1947
Male, age 18, unknown
69.1
Periaquaductal grey, dorsal nTPM: 69.7
2850
Male, age 76, both hemispheres
91.0
2464
Female, age 72, unknown
64.5
1840
Male, age 53, unknown
62.6
1831
Male, age 72, unknown
60.7
Periaquaductal grey, lateral nTPM: 75.0
2140
Male, age 76, both hemispheres
90.3
2053
Male, age 18, unknown
71.0
2272
Male, age 74, both hemispheres
63.5
Pretectal area nTPM: 67.7
2825
Male, age 18, unknown
75.3
2273
Male, age 74, both hemispheres
75.2
2667
Female, age 75, unknown
74.7
2316
Male, age 76, right hemisphere
74.2
1817
Female, age 42, unknown
69.0
1815
Male, age 53, unknown
67.3
1944
Female, age 72, unknown
64.5
2007
Male, age 72, unknown
63.5
2407
Male, age 75, both hemispheres
60.9
1816
Male, age 51, unknown
60.7
2224
Female, age 72, unknown
59.9
Red nucleus nTPM: 79.4
2769
Male, age 72, unknown
92.4
2227
Male, age 72, unknown
91.9
1865
Male, age 51, unknown
88.5
2503
Female, age 72, unknown
86.6
2725
Female, age 75, unknown
81.0
1904
Male, age 53, unknown
80.7
2823
Male, age 76, right hemisphere
78.8
1954
Female, age 42, unknown
77.6
1821
Female, age 72, unknown
75.9
2785
Male, age 18, unknown
70.6
2588
Male, age 74, left hemisphere
70.4
2584
Male, age 75, left hemisphere
58.0
Substantia nigra nTPM: 58.6
2699
Male, age 18, unknown
81.5
1851
Male, age 51, unknown
63.7
2583
Male, age 75, right hemisphere
63.4
1889
Female, age 72, unknown
61.5
1941
Male, age 53, unknown
61.0
2409
Female, age 72, unknown
60.2
1916
Female, age 42, unknown
57.0
2590
Female, age 75, unknown
49.2
2665
Male, age 74, both hemispheres
46.7
2241
Male, age 72, unknown
41.4
Superior colliculus nTPM: 72.2
1995
Male, age 72, unknown
91.6
1913
Female, age 42, unknown
88.4
1796
Male, age 53, unknown
83.4
2668
Female, age 75, unknown
71.2
2664
Male, age 75, both hemispheres
70.7
2087
Female, age 72, unknown
68.8
2261
Male, age 18, unknown
64.9
1839
Male, age 51, unknown
63.0
1895
Male, age 76, right hemisphere
60.6
2587
Male, age 74, left hemisphere
59.8
Ventral tegmental area nTPM: 64.7
2223
Female, age 72, unknown
74.7
2218
Male, age 76, both hemispheres
68.1
1942
Male, age 51, unknown
67.7
2021
Male, age 53, unknown
63.5
1915
Female, age 42, unknown
58.6
2410
Female, age 72, unknown
55.5
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
63.2
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 63.2
Samples: 139
Max nTPM: 139.1
Min nTPM: 23.3
Std nTPM: 18.8
Median nTPM: 61.6
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
139.1
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
112.3
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
108.5
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
106.6
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
106.6
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
100.7
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
100.2
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
96.5
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
92.9
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
90.3
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
88.7
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
87.8
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
87.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
86.5
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
86.0
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
85.7
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
85.2
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
82.6
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
82.3
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
80.7
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
79.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
79.4
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
79.2
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
78.7
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
78.4
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
78.3
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
77.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
77.8
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
77.5
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
76.8
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
76.7
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
76.7
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
76.4
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
76.3
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
75.7
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
75.4
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
74.3
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
74.1
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
73.2
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
73.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
72.4
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
71.5
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
71.0
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
70.4
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
70.4
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
69.1
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
68.4
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
68.2
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
68.1
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
68.0
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
68.0
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
67.1
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
67.1
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
66.8
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
66.7
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
66.6
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
66.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
65.2
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
65.1
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
64.4
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
64.3
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
63.9
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
63.3
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
63.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
62.8
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
62.4
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
62.4
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
61.9
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
61.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
61.6
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
61.6
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
61.1
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
60.7
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
59.1
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
59.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
59.0
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
58.9
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
58.8
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
58.6
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
58.5
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
58.4
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
58.3
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
57.1
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
57.1
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
56.9
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
56.6
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
56.3
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
56.2
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
55.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
55.3
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
55.1
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
54.8
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
54.8
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
54.7
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
53.7
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
53.1
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
52.8
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
52.4
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
51.9
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
51.7
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
51.7
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
51.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
50.3
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
49.9
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
49.4
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
49.1
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
49.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
48.9
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
48.7
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
48.7
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
48.4
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
48.2
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
48.2
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
47.6
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
47.6
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
46.9
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
46.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
45.9
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
45.5
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
45.4
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
45.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
44.6
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
44.3
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
42.2
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
42.1
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
41.0
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
40.9
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
39.9
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
39.9
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
38.9
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
35.6
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
35.6
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
34.2
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
31.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
30.3
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
30.2
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
28.5
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
24.6
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
23.3
Show allShow less
MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
26.2
Mouse sample
Sample description
nTPM
Midbrain nTPM: 26.3
Samples: 4
Max nTPM: 31.0
Min nTPM: 22.0
Sample A
Male
31.0
Sample B
Male
26.5
Sample C
Female
22.0
Sample D
Female
25.6
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.