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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
24.2
nTPM
Monaco:
17.9
nTPM
Schmiedel:
15.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
24.2
HPA sample
nTPM
gdT-cell nTPM: 15.6
Samples: 6
Max nTPM: 21.2
Min nTPM: 11.1
P10809_1007
12.7
P10809_1022
14.3
P10809_1041
11.1
P10809_1060
18.3
P10809_1077
21.2
P10809_1098
15.8
MAIT T-cell nTPM: 18.3
Samples: 6
Max nTPM: 28.8
Min nTPM: 12.8
P10809_1006
12.8
P10809_1024
15.4
P10809_1043
21.8
P10809_1062
14.7
P10809_1083
16.3
P10809_1097
28.8
Memory CD4 T-cell nTPM: 20.7
Samples: 6
Max nTPM: 26.9
Min nTPM: 14.7
P10809_1014
14.7
P10809_1026
18.9
P10809_1045
26.9
P10809_1064
20.4
P10809_1086
18.7
P10809_1113
24.7
Memory CD8 T-cell nTPM: 19.8
Samples: 5
Max nTPM: 23.8
Min nTPM: 15.5
P10809_1012
22.7
P10809_1027
15.5
P10809_1046
21.4
P10809_1065
15.5
P10809_1111
23.8
Naive CD4 T-cell nTPM: 16.3
Samples: 6
Max nTPM: 21.9
Min nTPM: 11.1
P10809_1015
14.8
P10809_1030
21.9
P10809_1049
19.7
P10809_1068
15.9
P10809_1085
11.1
P10809_1112
14.4
Naive CD8 T-cell nTPM: 16.8
Samples: 6
Max nTPM: 20.4
Min nTPM: 13.1
P10809_1016
14.3
P10809_1031
13.1
P10809_1050
19.1
P10809_1069
20.4
P10809_1087
16.7
P10809_1110
16.9
T-reg nTPM: 24.2
Samples: 6
Max nTPM: 37.3
Min nTPM: 13.9
P10809_1018
19.0
P10809_1037
29.2
P10809_1056
19.3
P10809_1075
26.7
P10809_1094
37.3
P10809_1106
13.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
17.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 12.5
Samples: 4
Max nTPM: 26.0
Min nTPM: 2.9
RHH5202_R3573
26.0
RHH5230_R3602
6.6
RHH5259_R3631
2.9
RHH5288_R3660
14.4
Effector memory CD8 T-cell nTPM: 10.2
Samples: 4
Max nTPM: 13.1
Min nTPM: 7.6
RHH5203_R3574
10.7
RHH5231_R3603
13.1
RHH5260_R3632
7.6
RHH5289_R3661
9.2
MAIT T-cell nTPM: 5.9
Samples: 4
Max nTPM: 9.0
Min nTPM: 4.6
RHH5233_R3605
4.7
RHH5205_R3576
5.2
RHH5262_R3634
9.0
RHH5297_R3663
4.6
Memory CD4 T-cell TFH nTPM: 11.8
Samples: 4
Max nTPM: 16.5
Min nTPM: 5.4
RHH5300_R3666
14.5
RHH5236_R3608
16.5
RHH5265_R3637
10.9
RHH5208_R3579
5.4
Memory CD4 T-cell Th1 nTPM: 11.1
Samples: 4
Max nTPM: 16.4
Min nTPM: 8.5
RHH5210_R3581
9.6
RHH5302_R3668
16.4
RHH5238_R3610
9.7
RHH5267_R3639
8.5
Memory CD4 T-cell Th1/Th17 nTPM: 15.7
Samples: 4
Max nTPM: 24.2
Min nTPM: 7.2
RHH5303_R3669
20.8
RHH5211_R3582
24.2
RHH5239_R3611
7.2
RHH5268_R3640
10.5
Memory CD4 T-cell Th17 nTPM: 12.0
Samples: 4
Max nTPM: 16.4
Min nTPM: 5.9
RHH5304_R3670
15.8
RHH5212_R3583
16.4
RHH5240_R3612
10.0
RHH5269_R3641
5.9
Memory CD4 T-cell Th2 nTPM: 13.8
Samples: 4
Max nTPM: 16.5
Min nTPM: 9.2
RHH5305_R3671
12.9
RHH5213_R3584
9.2
RHH5241_R3613
16.5
RHH5270_R3642
16.4
Naive CD4 T-cell nTPM: 9.4
Samples: 4
Max nTPM: 12.5
Min nTPM: 5.8
RHH5306_R3672
8.5
RHH5214_R3585
12.5
RHH5242_R3614
5.8
RHH5271_R3643
10.9
Naive CD8 T-cell nTPM: 7.5
Samples: 4
Max nTPM: 8.3
Min nTPM: 5.6
RHH5201_R3572
5.6
RHH5229_R3601
8.1
RHH5258_R3630
8.3
RHH5287_R3659
7.9
Non-Vd2 gdTCR nTPM: 16.2
Samples: 4
Max nTPM: 27.8
Min nTPM: 8.6
RHH5235_R3607
8.6
RHH5264_R3636
18.2
RHH5207_R3578
27.8
RHH5299_R3665
10.0
T-reg nTPM: 13.5
Samples: 4
Max nTPM: 16.7
Min nTPM: 10.7
RHH5301_R3667
14.8
RHH5237_R3609
11.7
RHH5266_R3638
10.7
RHH5209_R3580
16.7
Terminal effector memory CD4 T-cell nTPM: 15.6
Samples: 2
Max nTPM: 18.4
Min nTPM: 12.8
RHH5243_R3615
12.8
RHH5272_R3644
18.4
Terminal effector memory CD8 T-cell nTPM: 13.1
Samples: 4
Max nTPM: 18.3
Min nTPM: 8.8
RHH5232_R3604
14.4
RHH5204_R3575
18.3
RHH5261_R3633
8.8
RHH5296_R3662
10.8
Vd2 gdTCR nTPM: 17.9
Samples: 4
Max nTPM: 31.7
Min nTPM: 4.8
RHH5234_R3606
14.1
RHH5206_R3577
31.7
RHH5263_R3635
4.8
RHH5298_R3664
21.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.