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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
122.3
nTPM
HPA Brain:
28.2
nTPM
GTEx:
122.3
nTPM
FANTOM5:
54.7
Scaled Tags Per Million
Pig:
196.9
nTPM
Mouse:
342.8
nTPM
Allen mouse:
5.0
Expression energy
MIDBRAIN - Annotated protein expression
Pending normal tissue analysis
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
28.2
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 24.1
1827
Male, age 72, unknown
29.1
2666
Male, age 74, left hemisphere
26.7
2411
Female, age 72, unknown
25.4
1870
Female, age 42, unknown
24.4
1833
Male, age 53, unknown
23.8
2828
Female, age 72, unknown
23.8
2219
Male, age 76, both hemispheres
23.3
2019
Male, age 18, unknown
21.8
1830
Male, age 51, unknown
21.6
2586
Male, age 75, left hemisphere
21.5
Dorsal raphe nucleus nTPM: 25.0
2047
Male, age 72, unknown
27.8
1828
Male, age 53, unknown
26.4
2298
Female, age 72, unknown
25.9
2750
Male, age 76, both hemispheres
24.4
2016
Female, age 72, unknown
20.4
Inferior colliculus nTPM: 26.3
2097
Female, age 72, unknown
29.2
1848
Female, age 42, unknown
26.4
1890
Male, age 53, unknown
25.7
2849
Male, age 72, unknown
24.0
Median raphe nucleus nTPM: 26.1
2220
Male, age 76, midline
26.1
Periaquaductal grey, anterior nTPM: 24.6
1947
Male, age 18, unknown
26.8
1795
Male, age 51, unknown
25.0
2502
Female, age 75, unknown
22.1
Periaquaductal grey, dorsal nTPM: 23.0
1840
Male, age 53, unknown
24.3
2850
Male, age 76, both hemispheres
23.5
1831
Male, age 72, unknown
22.7
2464
Female, age 72, unknown
21.5
Periaquaductal grey, lateral nTPM: 21.1
2053
Male, age 18, unknown
24.7
2140
Male, age 76, both hemispheres
19.6
2272
Male, age 74, both hemispheres
18.9
Pretectal area nTPM: 25.9
1816
Male, age 51, unknown
32.2
2007
Male, age 72, unknown
30.6
1944
Female, age 72, unknown
29.4
1817
Female, age 42, unknown
28.6
2407
Male, age 75, both hemispheres
26.8
1815
Male, age 53, unknown
25.1
2224
Female, age 72, unknown
24.9
2667
Female, age 75, unknown
24.4
2825
Male, age 18, unknown
22.9
2316
Male, age 76, right hemisphere
20.2
2273
Male, age 74, both hemispheres
19.8
Red nucleus nTPM: 23.4
1821
Female, age 72, unknown
30.8
2725
Female, age 75, unknown
24.9
2503
Female, age 72, unknown
23.9
1865
Male, age 51, unknown
23.1
1954
Female, age 42, unknown
23.0
2584
Male, age 75, left hemisphere
22.8
2769
Male, age 72, unknown
22.8
2785
Male, age 18, unknown
22.8
2823
Male, age 76, right hemisphere
22.3
2588
Male, age 74, left hemisphere
22.0
1904
Male, age 53, unknown
21.7
2227
Male, age 72, unknown
21.0
Substantia nigra nTPM: 28.2
1916
Female, age 42, unknown
31.9
2409
Female, age 72, unknown
31.4
1889
Female, age 72, unknown
30.8
1851
Male, age 51, unknown
29.9
1941
Male, age 53, unknown
28.8
2241
Male, age 72, unknown
27.5
2583
Male, age 75, right hemisphere
26.7
2699
Male, age 18, unknown
25.8
2590
Female, age 75, unknown
25.2
2665
Male, age 74, both hemispheres
24.2
Superior colliculus nTPM: 23.5
1895
Male, age 76, right hemisphere
28.5
2668
Female, age 75, unknown
28.2
1796
Male, age 53, unknown
25.0
2261
Male, age 18, unknown
24.9
2087
Female, age 72, unknown
24.4
2587
Male, age 74, left hemisphere
22.4
1839
Male, age 51, unknown
21.3
2664
Male, age 75, both hemispheres
20.9
1913
Female, age 42, unknown
20.7
1995
Male, age 72, unknown
18.4
Ventral tegmental area nTPM: 26.0
1915
Female, age 42, unknown
30.3
2410
Female, age 72, unknown
28.2
2218
Male, age 76, both hemispheres
27.8
2021
Male, age 53, unknown
23.6
1942
Male, age 51, unknown
23.3
2223
Female, age 72, unknown
22.9
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
122.3
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 122.3
Samples: 139
Max nTPM: 208.0
Min nTPM: 64.4
Std nTPM: 31.5
Median nTPM: 116.9
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
208.0
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
205.4
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
202.5
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
197.9
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
193.0
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
192.3
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
190.2
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
189.6
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
189.5
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
189.4
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
182.3
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
181.7
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
181.0
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
178.5
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
176.4
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
175.2
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
169.3
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
168.9
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
168.6
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
157.9
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
157.8
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
156.4
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
155.5
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
153.7
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
150.6
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
149.9
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
142.6
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
141.1
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
141.0
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
138.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
138.2
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
138.0
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
136.5
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
135.6
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
134.5
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
133.4
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
133.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
130.9
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
130.6
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
130.5
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
129.2
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
128.9
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
128.3
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
127.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
127.2
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
126.9
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
125.2
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
125.1
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
125.1
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
125.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
124.1
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
124.0
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
123.6
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
123.0
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
122.5
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
122.5
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
121.4
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
121.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
120.0
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
119.9
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
119.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
119.8
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
119.6
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
119.0
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
119.0
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
118.6
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
118.5
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
117.7
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
117.1
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
116.9
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
116.5
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
116.2
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
115.2
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
114.4
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
113.5
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
113.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
112.8
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
110.8
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
110.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
110.1
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
110.0
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
109.8
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
109.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
109.3
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
109.2
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
108.5
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
108.1
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
108.0
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
107.6
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
106.4
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
106.3
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
105.6
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
105.2
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
104.4
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
103.5
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
103.3
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
103.1
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
102.6
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
101.5
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
101.2
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
101.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
100.6
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
100.3
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
100.3
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
100.3
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
99.8
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
99.4
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
98.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
97.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
96.8
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
96.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
95.8
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
95.7
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
95.6
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
95.0
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
95.0
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
94.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
93.5
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
92.9
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
92.6
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
92.3
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
92.1
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
91.4
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
90.3
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
90.2
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
89.4
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
89.4
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
88.8
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
86.1
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
85.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
84.3
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
82.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
82.3
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
80.6
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
78.9
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
78.6
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
77.9
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
74.2
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
64.4
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
342.8
Mouse sample
Sample description
nTPM
Midbrain nTPM: 342.8
Samples: 4
Max nTPM: 371.0
Min nTPM: 314.1
Sample A
Male
371.0
Sample B
Male
333.7
Sample C
Female
314.1
Sample D
Female
352.5
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.