DARS2

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:11.4 FPKM
GTEx:4.6 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA026506

 

Antibody HPA026528

 

Endothelial cells

Low   Medium  

Glandular cells

High   Medium  

Peripheral nerve/ganglion

Low   Medium  
   
   

COLON - HPA RNA-seq

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Average FPKM

11.4

overview Male, age 54
Sample 1
FPKM: 8.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 11.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 15.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 8.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 9.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 10.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 16.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

4.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 2.6
Samples: 149

Max RPKM: 5.5
Min RPKM: 1.2
Std RPKM: 0.7
Median RPKM: 2.6
GTEX-11TT1-0926-SM-5GU5M 5.5
GTEX-XBED-1726-SM-47JYO 4.8
GTEX-131XG-1526-SM-5GCNQ 4.7
GTEX-146FH-2426-SM-5Q5EW 4.7
GTEX-WQUQ-2626-SM-4MVNP 4.4
GTEX-ZTTD-2626-SM-57WEX 4.2
GTEX-YJ8A-1726-SM-5P9IQ 4.1
GTEX-WFON-1326-SM-4LVMN 4.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 6.6
Samples: 196

Max RPKM: 15.8
Min RPKM: 0.5
Std RPKM: 3.2
Median RPKM: 6.6
GTEX-R53T-1326-SM-48FCQ 15.8
GTEX-XV7Q-2126-SM-4BRVX 14.8
GTEX-U4B1-1126-SM-4DXV3 14.4
GTEX-O5YT-1426-SM-3MJHC 14.2
GTEX-PWOO-1326-SM-48TCJ 13.6
GTEX-146FQ-1926-SM-5NQBY 12.9
GTEX-OXRK-1726-SM-3NB16 12.7
GTEX-WFG7-1526-SM-4LVMG 12.6
Show all